Comparer for protein structure rankings
Qian, J. et.al (2001) Nucleic Acids Research 29: 1750-64
[First 30 records][Entire table]
[Display values][Display ranks]
Image size: [50][70][100][120]G(cele)
fold occurrence in CeleJ(pdbb, inter)
interaction with beta proteins on different chains [pdb]J(pdball,intra)
interaction on same chains [pdb]J(pdbb,intra)
interaction with beta proteins on same chains [pdb]J(pdball,all)
interaction types [pdb]Max in column 829 396 501 403 950 Min in column 1 1 1 1 1 Average 31.6 35.1 27.1 21.3 39.5 Non zero hits 247 64 201 56 319 Ranked folds (click on arrows to re-rank)
d1inp__:. (1.39)4 1 61 0 92
d1atb__:. (1.39)38 1 0 0 1
d1aj3__:. (1.39)63 1 5 0 18
d2prp__:. (1.39). 1 0 0 24
d1uag_2:. (1.39)0 1 11 11 60
d1cdda_:. (1.39)2 1 0 0 19
d1bgp__:. (1.39)30 1 1 0 6
d1ld9a2:. (1.39)0 1 19 15 54
d1orda3:. (1.39)0 1 8 2 13
d1uch__:. (1.39)36 1 14 14 32
d3bcl__:. (1.39). 2 0 0 2
d1lkte_:. (1.39). 2 2 1 4
d1sat_1:. (1.39)0 2 17 0 27
d1yna__:. (1.39)36 2 0 0 2
d1who__:. (1.39)54 2 35 15 37
d2tct_1:. (1.39)0 2 0 0 2
d1auua_:. (1.39)13 2 0 0 2
d1opy__:. (1.39)6 2 68 46 121
d1dun__:. (1.39)3 2 0 0 2
d3cms__:. (1.39)25 2 66 20 68
d1aj2__:. (1.39)123 3 357 156 747
d1mxa_3:. (1.39)15 3 0 0 5
d1alo_7:. (1.39)6 3 22 7 39
d1slua_:. (1.39)0 4 6 6 10
d1dar_1:. (1.39)21 4 0 0 4
d1vhh__:. (1.39)0 4 0 0 8
d1gpl_1:. (1.39). 4 16 16 20
d1aly__:. (1.39). 4 0 0 11
d1yua_2:. (1.39)0 5 31 7 58
d1hcc__:. (1.39)35 5 0 0 51
The images of protein structures were taken from www.rcsb.org
The classification of folds is from SCOP version 1.39
Questions, comments, and suggestions qian@csb.yale.edu