YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Report on SCOP Fold corresponding to representative domain d1ld9a2 [SCOP 1.39 Fold 4.015]

  Interaction Report for Fold 4.015

  Function Classification
 Augmented Flybase+ENZYMEGenProtECMIPS
d1ld9a2D-5.6.2NONO
  Rankings
O C C U R R E N C E S
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Number 881221048292111822020021100
Rank 3604581122821662621112921914996102346259137136
%ile 995965400629959879146541684173505601
A L I G N M E N T S
  Aligned PairsUntrimmed RMSTrimmed RMS% Seq IdentityStructure P-ValueSequence P-Value 
FOLD
(General)
170663.390.9144.038.60e-032.27e-01
Rank 11671463844141
%ile 1002332828035
FOLD (Exclusive) 15495.041.7716.091.81e-039.99e-01
Rank 24544221752
%ile 96212361709
E X P R E S S I O N
Absolute Reference GenomeReference TranscriptomeWild-type (Jelinsky)Wild-type (Holstege)SAGEMating-type (A)Mating-type (Alpha)GALHeat Shock 
%%E%E%E%E%E%E%E%E
Value 0.20.20.30.51.60.30.60.71.30.62.40.52.00.52.10.62.8
Rank 7966454527644728193614412239223616
%ile 6369797987707887918393818982898392
Ratio Reference GenomeReference TranscriptomeCDC28 (Yeast)CDC15 (Yeast)Alpha (Yeast)Diauxic Shift (Yeast)Sporulation (Yeast)Heat Shock (E.coli)Development (Worm)
Value 0.230.250.130.230.250.160.360.290.98
Rank 715110911114513262117116
Value 778365645357806262
M I S C E L L A N E O U S
   Rank%ile Year IdentifiedRank%ile
SIZE 109 28532AGE764044
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Occurrences:Size 8.0830.0180.0180.01800.0377.6060.0180.1010.1650.0180.01800.018000.0180.0090.01800
Rank 4533750122723511512968619240100103317335137137
%ile 996471631679869929454571741175427411
  List of identifiers associated with Fold 4.015.
d1a1ma2 d1a1na2 d1a1oa2 d1a6aa2 d1a6ab2 d1a9da2 d1a9ka2 d1a9kd2 d1agba2 d1agca2
d1agda2 d1agea2 d1agfa2 d1akja2 d1ao7a2 d1aqda2 d1aqdb2 d1aqdd2 d1aqde2 d1aqdg2
d1aqdh2 d1aqdj2 d1aqdk2 d1cd1a2 d1cd1c2 d1dlha2 d1dlhb2 d1dlhd2 d1dlhe2 d1frta2
d1hhga2 d1hhgd2 d1hhha2 d1hhia2 d1hhid2 d1hhja2 d1hhjd2 d1hhka2 d1hhkd2 d1hlaa2
d1hoca2 d1hsaa2 d1hsad2 d1hsba2 d1iaka2 d1iakb2 d1ieaa1 d1ieab1 d1ieac1 d1iead1
d1ieba1 d1iebb1 d1iebc1 d1iebd1 d1ld9a2 d1ld9d2 d1ldph2 d1mhca2 d1mhcd2 d1seba2
d1sebb2 d1sebe2 d1sebf2 d1tmca_ d1vaca2 d1vada2 d2ckbh2 d2ckbi2 d2clra2 d2clrd2
d2hlaa2 d2mhaa2 d2mhac2 d2seba2 d2sebb2 d2vaaa2 d2vaba2 d3frua2 d3fruc2 d3frue2
d3hlaa2

Scop information.
RCSB PDB information.
fold_occurrences,881,3,99,#fde3e3,2,60,59,#fafde3,2,45,65,#fdfce3,1,81,40,#ecfde3,0,122,0,#edf6f3,4,82,62,#fdfce3,829,1,99,#fde3e3,2,66,59,#fafde3,11,26,87,#fde8e3,18,21,91,#fde5e3,2,112,46,#f3fde3,2,92,54,#f7fde3,0,191,1,#edf6f3,2,49,68,#fdf7e3,0,96,4,#edf6f3,0,102,1,#edf6f3,2,34,73,#fdf4e3,1,62,50,#f3fde3,1,59,56,#fafde3,0,137,0,#edf6f3,0,136,1,#edf6f3,fold_alignmnents,17066,1,100,#fde3e3,3.39,167,23,#fafde3,0.91,146,32,#fdfce3,44.03,38,82,#fde8e3,8.60e-03,44,80,#fde8e3,2.27e-01,141,35,#fdfce3,15465,1,100,#fde3e3,3.21,148,46,#e3fdfa,0.81,126,54,#e3fdfa,46.88,34,88,#ecfde3,8.85e-03,40,85,#e3fde3,1.49e-01,111,59,#e3fdfa,190,4,93,#fde3e3,15.89,16,72,#fde5e3,6.27,11,81,#fde3e3,17.73,166,-191,#ecfde3,4.58e-01,8,86,#fde3e3,9.40e-01,15,74,#fde5e3,1549,2,96,#fde3e3,5.04,45,21,#fdfce3,1.77,44,23,#fdfce3,16.09,22,61,#fdebe3,1.81e-03,17,70,#fde8e3,9.99e-01,52,9,#fafde3,1281,1,98,#e3fdfa,4.81,59,50,#e3fdfa,1.65,51,57,#e3fdfa,16.47,53,55,#e3fdfa,3.48e-03,8,93,#e3fdfa,9.88e-01,73,38,#e3fdfa,190,4,97,#e3fdfa,15.89,16,-1500,#e3fdfa,6.27,11,-1000,#e3fdfa,17.73,166,-16500,#e3fdfa,4.58e-01,8,-700,#e3fdfa,,0,100,#fde3e3,expression_abs,0.2,79,63,#fdfce3,0.2,66,69,#fdf7e3,0.3,45,79,#fdeee3,0.5,45,79,#fdeee3,1.6,27,87,#fde8e3,0.3,64,70,#fdf4e3,0.6,47,78,#fdeee3,0.7,28,87,#fde8e3,1.3,19,91,#fde5e3,0.6,36,83,#fdebe3,2.4,14,93,#fde5e3,0.5,41,81,#fdebe3,2.0,22,89,#fde8e3,0.5,39,82,#fdebe3,2.1,22,89,#fde8e3,0.6,36,83,#fdebe3,2.8,16,92,#fde5e3,expression_ratio,0.23,71,77,#fdf7e3,0.25,51,83,#fdeee3,0.13,109,65,#f3fde3,0.23,111,64,#f3fde3,0.25,145,53,#e7fde3,0.16,132,57,#ecfde3,0.36,62,80,#fdf4e3,0.29,117,62,#f3fde3,0.98,116,62,#f3fde3,miscellaneous,109,285,32,#e7fde3,8.083,4,99,#fde3e3,0.018,53,64,#fdfce3,0.018,37,71,#fdf7e3,0.018,50,63,#fdfce3,0,122,1,#edf6f3,0.037,72,67,#fdf7e3,7.606,3,98,#fde3e3,0.018,51,69,#fdf7e3,0.101,15,92,#fde5e3,0.165,12,94,#fde5e3,0.018,96,54,#f7fde3,0.018,86,57,#fafde3,0,192,1,#edf6f3,0.018,40,74,#fdf4e3,0,100,1,#edf6f3,0,103,1,#edf6f3,0.018,31,75,#fdf4e3,0.009,73,42,#ecfde3,0.018,35,74,#fdf4e3,0,137,1,#edf6f3,0,137,1,#edf6f3,76,404,4,#e3fdfa