Report on Structure d1opy_

Report on SCOP Fold corresponding to representative domain d1opy__ [SCOP 1.39 Fold 4.013]

Interaction Report for Fold 4.013

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1opy__ E-5.3.3.1 NO NO

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 14 0 0 0 0 2 6 0 1 2 0 2 0 0 0 0 0 1 0 0 0

Rank 209 148 129 136 122 124 114 163 125 113 209 92 191 153 96 102 127 62 135 137 136

%ile 38 0 0 0 0 43 54 1 37 52 0 54 1 0 4 1 1 50 1 0 1

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 105 6.22 1.90 16.73 1.11e-03 9.41e-01
Rank 28 98 73 196 63 51
%ile 87 55 66 9 71 76
FOLD (Exclusive) 86 6.58 2.09 15.76 1.35e-03 1
Rank 10 29 27 25 18 1
%ile 82 49 53 56 68 98
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 0.1 0.1 0.4 0.2 0.8 0.2 0.9 0.1 -0.1 0.1 0.4 0.1 0.2 0.1 0.5 0.1 -0.2
Rank 104 94 36 72 39 77 34 82 92 96 48 93 60 98 55 99 90
%ile 52 56 83 66 82 64 84 62 57 55 77 57 72 54 74 54 58
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value 0.06 0.13 0.13 0.20 0.19 0.15 0.33 0.39 1.10
Rank 142 86 109 156 182 157 78 77 75
Value 54 72 65 50 41 49 75 75 76
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 97 310 26 AGE 92 255 39
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 0.144 0 0 0 0 0.021 0.062 0 0.010 0.021 0 0.021 0 0 0 0 0 0.010 0 0 0

Rank 167 148 129 136 122 104 94 164 112 88 209 78 192 153 100 103 128 65 136 137 137

%ile 51 1 1 1 1 52 62 1 44 62 0 61 1 1 1 1 1 48 1 1 1

List of identifiers associated with Fold 4.013.

d1a2ka_ d1a2kb_ d1a2va2 d1a2va3 d1a2vb2 d1a2vb3 d1a2vc2 d1a2vc3 d1a2vd2 d1a2vd3
d1a2ve2 d1a2ve3 d1a2vf2 d1a2vf3 d1a67__ d1a90__ d1ar0a_ d1ar0b_ d1aska_ d1askb_
d1av4_2 d1av4_3 d1avk_2 d1avk_3 d1avl_2 d1avl_3 d1cewi_ d1cyu__ d1cyv__ d1dvc__
d1dvd__ d1iska_ d1iskb_ d1ksia2 d1ksia3 d1ksib2 d1ksib3 d1mola_ d1molb_ d1oaca2
d1oaca3 d1oacb2 d1oacb3 d1opy__ d1ouna_ d1ounb_ d1spua2 d1spua3 d1spub2 d1spub3
d1std__ d1stfi_ d1udii_ d3mon.1 d3mon.2 d3mon.3 d3mon.4 d4mon.1 d4mon.2

Scop information.
RCSB PDB information.

fold_occurrences,14,209,38,#ecfde3,0,148,0,#edf6f3,0,129,0,#edf6f3,0,136,0,#edf6f3,0,122,0,#edf6f3,2,124,43,#effde3,6,114,54,#f7fde3,0,163,1,#edf6f3,1,125,37,#ecfde3,2,113,52,#f7fde3,0,209,0,#edf6f3,2,92,54,#f7fde3,0,191,1,#edf6f3,0,153,0,#edf6f3,0,96,4,#edf6f3,0,102,1,#edf6f3,0,127,1,#edf6f3,1,62,50,#f3fde3,0,135,1,#edf6f3,0,137,0,#edf6f3,0,136,1,#edf6f3,fold_alignmnents,105,28,87,#fde5e3,6.22,98,55,#fdf4e3,1.90,73,66,#fdebe3,16.73,196,9,#f3fde3,1.11e-03,63,71,#fdebe3,9.41e-01,51,76,#fde8e3,8,84,69,#e3fdfa,2.98,154,44,#e3fdfa,1.00,109,60,#e3fdfa,18.91,170,38,#e3fdfa,1.05e-10,123,55,#e3fdfa,8.75e-01,42,85,#e3fde3,0,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,86,10,82,#fde5e3,6.58,29,49,#fdeee3,2.09,27,53,#fdeee3,15.76,25,56,#fdeee3,1.35e-03,18,68,#fdebe3,1,1,98,#fde3e3,7,42,26,#e3fdfa,3.09,86,27,#e3fdfa,1.03,77,35,#e3fdfa,16.77,45,62,#e3fdfa,1.19e-10,68,42,#e3fdfa,1,1,99,#e3fdfa,0,172,-46,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,,0,100,#fde3e3,expression_abs,0.1,104,52,#f7fde3,0.1,94,56,#fafde3,0.4,36,83,#fdebe3,0.2,72,66,#fdf7e3,0.8,39,82,#fdebe3,0.2,77,64,#fdfce3,0.9,34,84,#fdebe3,0.1,82,62,#fdfce3,-0.1,92,57,#fafde3,0.1,96,55,#fafde3,0.4,48,77,#fdeee3,0.1,93,57,#fafde3,0.2,60,72,#fdf4e3,0.1,98,54,#f7fde3,0.5,55,74,#fdf4e3,0.1,99,54,#f7fde3,-0.2,90,58,#fafde3,expression_ratio,0.06,142,54,#e7fde3,0.13,86,72,#fdfce3,0.13,109,65,#f3fde3,0.20,156,50,#e3fde3,0.19,182,41,#e3fdea,0.15,157,49,#e3fde3,0.33,78,75,#fdfce3,0.39,77,75,#fdfce3,1.10,75,76,#fdf7e3,miscellaneous,97,310,26,#e3fde3,0.144,167,51,#f7fde3,0,148,1,#edf6f3,0,129,1,#edf6f3,0,136,1,#edf6f3,0,122,1,#edf6f3,0.021,104,52,#f7fde3,0.062,94,62,#fdfce3,0,164,1,#edf6f3,0.010,112,44,#effde3,0.021,88,62,#fdfce3,0,209,0,#edf6f3,0.021,78,61,#fafde3,0,192,1,#edf6f3,0,153,1,#edf6f3,0,100,1,#edf6f3,0,103,1,#edf6f3,0,128,1,#edf6f3,0.010,65,48,#f3fde3,0,136,1,#edf6f3,0,137,1,#edf6f3,0,137,1,#edf6f3,92,255,39,#ecfde3