YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Report on SCOP Fold corresponding to representative domain d1who__ [SCOP 1.39 Fold 2.006]

  Interaction Report for Fold 2.006

  Function Classification
 Augmented Flybase+ENZYMEGenProtECMIPS
d1who__E-4.2.1.94NONO
  Rankings
O C C U R R E N C E S
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Number 8000001654001000000000000
Rank 6414812913612233321632004120920019115396102127124135137136
%ile 8100008487108200104111101
A L I G N M E N T S
  Aligned PairsUntrimmed RMSTrimmed RMS% Seq IdentityStructure P-ValueSequence P-Value 
FOLD
(General)
124.571.3318.913.69e-066.02e-01
Rank 82143119162101111
%ile 623445255349
FOLD (Exclusive) 64.451.9514.487.33e-061
Rank 31533144381
%ile 46746233398
E X P R E S S I O N
Absolute Reference GenomeReference TranscriptomeWild-type (Jelinsky)Wild-type (Holstege)SAGEMating-type (A)Mating-type (Alpha)GALHeat Shock 
%%E%E%E%E%E%E%E%E
Value 0.70.2-0.70.2-0.80.3-0.60.4-0.60.2-0.70.2-0.70.2-0.80.2-0.7
Rank 306614772163641494313174164721457818378154
%ile 8669326624703180396524663364156429
Ratio Reference GenomeReference TranscriptomeCDC28 (Yeast)CDC15 (Yeast)Alpha (Yeast)Diauxic Shift (Yeast)Sporulation (Yeast)Heat Shock (E.coli)Development (Worm)
Value 0.350.050.240.200.210.150.170.310.99
Rank 5212356156176157169108113
Value 836082504349456563
M I S C E L L A N E O U S
   Rank%ile Year IdentifiedRank%ile
SIZE 126 25140AGE9128532
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Occurrences:Size 0.63500000.1270.429000.07900000000000
Rank 51148129136122243216420029209200192153100103128125136137137
%ile 8511118987108700111111111
  List of identifiers associated with Fold 2.006.
d1a25a_ d1a25b_ d1djga2 d1djgb2 d1djha2 d1djhb2 d1djia2 d1djib2 d1djwa2 d1djwb2
d1djxa2 d1djxb2 d1djya2 d1djyb2 d1djza2 d1djzb2 d1qasa2 d1qasb2 d1qata2 d1qatb2
d1rlw__ d1rsy__ d1who__ d1whp__ d2isda2 d2isdb2 d3dpa_2

Scop information.
RCSB PDB information.
fold_occurrences,80,64,81,#fdebe3,0,148,0,#edf6f3,0,129,0,#edf6f3,0,136,0,#edf6f3,0,122,0,#edf6f3,16,33,84,#fdebe3,54,32,87,#fde8e3,0,163,1,#edf6f3,0,200,0,#edf6f3,10,41,82,#fdebe3,0,209,0,#edf6f3,0,200,0,#edf6f3,0,191,1,#edf6f3,0,153,0,#edf6f3,0,96,4,#edf6f3,0,102,1,#edf6f3,0,127,1,#edf6f3,0,124,1,#edf6f3,0,135,1,#edf6f3,0,137,0,#edf6f3,0,136,1,#edf6f3,fold_alignmnents,12,82,62,#fdeee3,4.57,143,34,#fdfce3,1.33,119,45,#fdf7e3,18.91,162,25,#fafde3,3.69e-06,101,53,#fdf4e3,6.02e-01,111,49,#fdf4e3,6,90,67,#e3fdfa,4.69,112,59,#e3fdfa,0.72,136,50,#e3fdfa,23.33,131,52,#e3fdfa,3.89e-08,103,62,#e3fdfa,2.05e-01,106,61,#e3fdfa,1,100,-75,#fdfce3,6.50,65,-14,#fdeee3,0.37,146,-156,#f3fde3,27.78,114,-100,#fafde3,6.37e-11,93,-63,#fdf7e3,4.68e-09,87,-53,#fdf7e3,6,31,46,#fdf4e3,4.45,53,7,#f7fde3,1.95,31,46,#fdf4e3,14.48,44,23,#fdfce3,7.33e-06,38,33,#fdf7e3,1,1,98,#fde3e3,4,53,7,#e3fdfa,4.10,73,38,#e3fdfa,0.50,89,25,#e3fdfa,22.79,5,96,#e3fdfa,3.76e-10,65,45,#e3fdfa,2.71e-01,87,26,#e3fdfa,1,100,15,#e3fdfa,6.50,65,-6400,#e3fdfa,0.37,146,-14500,#e3fdfa,27.78,114,-11300,#e3fdfa,6.37e-11,93,-9200,#e3fdfa,,0,100,#fde3e3,expression_abs,0.7,30,86,#fde8e3,0.2,66,69,#fdf7e3,-0.7,147,32,#e7fde3,0.2,72,66,#fdf7e3,-0.8,163,24,#e3fde3,0.3,64,70,#fdf4e3,-0.6,149,31,#e7fde3,0.4,43,80,#fdeee3,-0.6,131,39,#ecfde3,0.2,74,65,#fdf7e3,-0.7,164,24,#e3fde6,0.2,72,66,#fdf7e3,-0.7,145,33,#e7fde3,0.2,78,64,#fdfce3,-0.8,183,15,#e3fdea,0.2,78,64,#fdfce3,-0.7,154,29,#e3fde3,expression_ratio,0.35,52,83,#fdeee3,0.05,123,60,#effde3,0.24,56,82,#fdf4e3,0.20,156,50,#e3fde3,0.21,176,43,#e3fdea,0.15,157,49,#e3fde3,0.17,169,45,#e3fde6,0.31,108,65,#f7fde3,0.99,113,63,#f3fde3,miscellaneous,126,251,40,#ecfde3,0.635,51,85,#fdebe3,0,148,1,#edf6f3,0,129,1,#edf6f3,0,136,1,#edf6f3,0,122,1,#edf6f3,0.127,24,89,#fde8e3,0.429,32,87,#fde8e3,0,164,1,#edf6f3,0,200,0,#edf6f3,0.079,29,87,#fde8e3,0,209,0,#edf6f3,0,200,0,#edf6f3,0,192,1,#edf6f3,0,153,1,#edf6f3,0,100,1,#edf6f3,0,103,1,#edf6f3,0,128,1,#edf6f3,0,125,1,#edf6f3,0,136,1,#edf6f3,0,137,1,#edf6f3,0,137,1,#edf6f3,91,285,32,#e7fde3