Specific analysis tables for each genome

These are mostly based on old fold assignments but may still be useful. In particular, they are based on pairwise assignments with FASTA and scop 1.32. These tables make extensive use of the idea of "masking" various regions of the genome. (Help on this idea.)

Click on an abbreviation name for a list of local tables pertinent to each genome.

Abbrev.

Genome

Size (Mb)

Reference

Website URL (http://…)

CE

Caenorhabditis
elegans

97

Consortium, Science 282:2012-2018 (1998)

www.sanger.ac.uk/Projects/C_elegans

CE-wp16

Caenorhabditis
elegans
(just wormpep-16)

97

Consortium, Science 282:2012-2018 (1998)

www.sanger.ac.uk/Projects/C_elegans/wormpep

SC

Saccharomyces cerevisiae

13

Goffeau et. al., Nature 387 (Suppl.) 5-105 (1997)

genome-www.stanford.edu/
Saccharomyces

EC

Escherichia coli

4.60

Blattner et. al., Science 277:1453-1462 (1997)

www.genetics.wisc.edu