Table 1, Broad Structural and Functional Categories

A. Functional categories in Swissprot 35

Cat.

Cat. Name

Abbrev.

# of Cat.

0.0.0

Non-enzymes

NONENZ

1

1.*.*

Oxidoreductases

OX

86

2.*.*

Transferases

TRAN

28

3.*.*

Hydrolases

HYD

53

4.*.*

Lyases

LY

15

5.*.*

Isomerases

ISO

16

6.*.*

Ligases

LIG

9

Total:

208


List of the functional (enzymatic) categories in Swissprot and the abbreviations used throughout the paper. The values denote the number of 3-component EC-numbers in each category.

B. Structural categories in SCOP 1.35

Cat.

Fold Class

Abbrev.

# of Folds

1

All-alpha

A

81

2

All-beta

B

57

3

Alpha and beta

A/B

70

4

Alpha plus beta

A+B

91

5

Multidomain

MULTI

19

7

Small proteins

SML

43

Total:

361


List of the structural classes in SCOP studied in this paper and the abbreviations used for the classes. Values denote the number of folds in each class in scop 1.35.

© 1998 Hedi Hegyi & Mark Gerstein
© 1998 Graphics - Jimmy Lin