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Fold Assignments with Multiple-Sequence Methods
(PSI-blast and FASTA) and a recent version of the PDB (scop 1.35)
- Directory of brand new
worm to PDB matches, based on a careful running of PSI-blast.
(This will perhaps be more comprehensive than other match sets.) In particular,
this contains a table of
all PDB matches
and just
small
protein PDB matches
- Figures from the paper, showing key fold statistics
Earlier Analysis Based on Only Pairwise Comparison
- Tab-delimited database table [txt]
- Formatted table [pdf,
html]
- Metazoan-only folds
- Venn Diagram showing the sharing of folds between worm, yeast, and E. coli [pdf,
gif]
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