fold-usage-simple

Overall fold usage in the yeast-worm comparison in the form of an HTML table

obj_id_ bestrep EC SC CE CO HI SS HP MJ MP MG objname
_1.001 d1flp__ 0 1 2 2 0 7 0 0 0 0 Globin-like
_1.002 d1hdj__ 7 18 30 7 6 9 4 0 5 5 Long alpha-hairpin
_1.003 d1ctj__ 0 2 2 0 0 2 3 0 0 0 Cytochrome c
_1.004 d1enh__ 7 22 86 81 4 2 1 2 0 0 DNA-binding 3-helical bundle
_1.005 d1dtr_2 0 0 0 0 0 0 0 1 0 0 Diphtheria toxin repressor (DtxR) dimerization domain
_1.006 d1tns__ 1 0 0 0 1 0 0 0 0 0 Mu transposase, DNA-binding domain
_1.007 d2spca_ 0 0 4 1 0 0 0 0 0 0 Spectrin repeat unit
_1.008 d1bdd__ 0 0 0 0 0 0 0 0 0 0 Immunoglobulin-binding protein A modules
_1.009 d1bal__ 2 0 2 0 2 0 0 0 0 0 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
_1.010 d2erl__ 0 0 0 0 0 0 0 0 0 1 Protozoan pheromone proteins
_1.011 d2abd__ 0 1 6 1 0 0 0 0 0 0 Acyl-CoA binding protein
_1.013 d2end__ 0 0 0 0 0 0 0 0 0 0 T4 endonuclease V
_1.014 d1lis__ 0 0 0 0 0 0 0 0 0 0 Lysin
_1.015 d1bmfg_ 1 1 1 0 1 1 1 0 1 1 F1-ATPase, gamma subunit
_1.016 d1lbu_1 0 0 0 0 0 0 0 0 0 0 Zn2+ DD-carboxypeptidase, the Nt-dom.
_1.017 d1hme__ 0 6 9 5 0 0 0 0 1 0 HMG-box
_1.018 d1bfma_ 0 2 1 1 0 0 0 6 0 0 Histone-fold
_1.019 d1mmog_ 0 0 0 0 0 0 0 0 0 0 Methane monooxygenase hydrolase, gamma subunit
_1.020 d1nfn__ 7 0 14 14 0 0 0 1 0 0 Four-helical up-and-down bundle
_1.021 d1fha__ 4 2 2 1 4 3 2 0 1 1 Ferritin-like
_1.022 d1gnc__ 0 0 0 0 0 0 0 0 0 0 4-helical cytokines
_1.023 d1acp__ 1 1 3 0 1 1 2 0 0 0 Acyl carrier protein-like
_1.024 d1rpo__ 0 0 0 0 0 0 0 0 0 0 ROP protein
_1.025 d1ytfb1 0 2 2 0 0 0 0 0 0 0 Transcription factor IIA (TFIIA), Nt-dom.
_1.027 d1pou__ 15 0 4 4 2 0 0 1 0 0 lambda repressor-like DNA-binding domains
_1.028 d2tct_1 11 0 0 0 3 11 0 0 0 0 TetR/NARL DNA-binding domain
_1.029 d1coo__ 1 0 0 0 1 1 1 0 1 1 the Ct-dom. of RNA polymerase alpha subunit
_1.030 d1mdya_ 0 0 11 11 0 0 0 0 0 0 Helix-loop-helix DNA-binding domain
_1.031 d4icb__ 0 7 45 12 0 1 0 0 0 0 EF Hand-like
_1.032 d1para_ 1 0 0 0 1 0 0 0 0 0 Met repressor-like
_1.033 d1dsba1 1 0 0 0 1 0 0 0 0 0 Disulphide-bond formation facilitator (DSBA), insertion domain
_1.034 d2gsta1 0 0 15 15 0 0 0 0 0 0 Glutathione S-transferases, Ct-dom.
_1.035 d1bmta1 1 0 1 1 1 1 0 0 0 0 Methionine synthase domain
_1.036 d1c5a__ 0 0 0 0 0 0 0 0 0 0 Anaphylotoxins (complement system)
_1.037 d1occh_ 0 1 1 0 0 0 0 0 0 0 Cytochrome c oxidase subunit h
_1.038 d1hyp__ 0 0 0 0 0 0 1 0 0 1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
_1.040 d1olga_ 0 0 0 0 0 0 0 0 0 0 p53 tetramerization domain
_1.041 d1adt_1 0 0 0 0 0 0 0 0 0 0 A domain of early E2A DNA-binding protein, ADDBP
_1.042 d1hnr__ 6 0 0 0 4 1 1 0 1 1 Prokaryotic DNA-bending protein
_1.043 d1alo_1 3 0 3 3 0 0 0 0 0 0 Aldehyde oxidoreductase, domain 2
_1.044 d1aep__ 0 0 0 0 0 0 0 0 0 0 Apolipophorin-III
_1.045 d1axn__ 0 0 4 4 0 0 0 0 0 0 Annexin
_1.046 d1tada1 0 2 16 0 0 0 0 0 0 0 Transducin (alpha subunit), insertion domain
_1.047 d1trla_ 0 0 0 0 0 0 0 0 0 0 Thermolysin-like metalloproteases, Ct-dom.
_1.048 d2ts1_1 1 1 1 0 0 0 0 0 1 1 Tyrosyl-tRNA synthetase, middle domain
_1.049 d1bmfa1 2 2 2 0 2 2 2 0 2 2 Left-handed superhelix
_1.050 d1gds__ 0 0 0 0 0 0 0 0 0 0 HIV-1 capsid protein, N-terminal core domain
_1.051 d1tam__ 0 0 0 0 0 0 0 0 0 0 Retroviral matrix proteins
_1.052 d1finb1 0 13 17 6 0 0 0 2 0 0 Cyclin-like
_1.053 d1llp__ 1 1 12 12 0 0 0 0 0 0 Heme-dependent peroxidases
_1.054 d2abk__ 2 2 1 0 2 1 2 2 0 0 DNA-glycosylase
_1.055 d1gln_1 1 0 0 0 1 1 1 0 1 1 Anticodon-binding (C-terminal) domain of glutamyl-tRNA synthetase (GluRS)
_1.056 d1rlr_1 1 2 1 0 1 1 1 0 0 0 R1 subunit of ribonucleotide reductase, Nt-dom.
_1.057 d1dnpa1 1 1 0 0 0 2 0 0 0 0 FAD-binding (C-terminal) domain of DNA photolyase
_1.058 d1lla_1 0 0 1 1 0 0 0 0 0 0 Hemocyanin, N-terminal and middle domains
_1.059 d2pgd_1 1 2 1 0 1 1 0 0 0 0 6-phosphogluconate & Acyl-CoA dehydrogenases, Ct-dom.
_1.060 d1utg__ 0 0 0 0 0 0 0 0 0 0 Uteroglobin-like
_1.061 d1gai__ 1 1 0 0 0 1 0 1 0 0 Glycosyltransferases of the superhelical fold
_1.062 d1csh__ 2 3 1 0 0 1 1 0 0 0 Citrate synthase
_1.063 d1phc__ 0 3 108 62 0 2 0 0 0 0 Cytochrome P450
_1.064 d1fiaa_ 3 0 0 0 1 0 0 0 0 0 FIS protein
_1.065 d1prcc_ 0 0 0 0 0 0 0 0 0 0 Photosynthetic reaction centre (cytochrome subunit)
_1.066 d3wrp__ 1 0 0 0 1 0 0 0 0 0 Trp repressor
_1.067 d1aora1 0 0 0 0 0 0 0 0 0 0 Aldehyde ferredoxin oxidoreductase, Ct-dom.s
_1.068 d1vnc__ 0 0 0 0 0 0 0 0 1 0 Vanadium-containing chloroperoxidase
_1.069 d1bvp11 0 0 0 0 0 0 0 0 0 0 Bluetongue virus coat protein vp7 (BTV-10 vp7), alpha-helical domain
_1.070 d1occe_ 1 1 1 0 1 0 0 0 0 0 alpha-alpha superhelix
_1.071 d2sblb1 0 0 0 0 0 0 0 0 0 0 Lipoxigenase, Ct-dom.
_1.072 d2tct_2 0 0 0 0 0 0 0 0 0 0 Tetracyclin repressor (Tet-repressor, TetR), Ct-dom.
_1.073 d1lbd__ 0 0 44 44 0 0 0 0 0 0 Ligand-binding domain of nuclear receptor
_1.077 d1fps__ 2 2 2 0 2 1 1 1 0 0 Isoprenyl diphosphate synthases
_1.078 d1oela1 1 9 7 0 1 2 1 1 1 1 GroEL, the ATPase domain
_1.079 d1ecma_ 2 1 0 0 2 0 1 1 0 0 Chorismate mutase II
_1.080 d1poc__ 0 0 2 2 0 0 0 0 0 0 Phospholipase A2
_1.081 d1zta__ 0 1 0 0 0 0 0 0 0 0 Oligomers of long helices
_2.001 d1maj__ 15 1 113 94 0 1 0 0 0 0 Immunoglobulin-like beta-sandwich
_2.002 d1exg__ 0 0 0 0 0 2 0 0 0 0 Common fold of diphtheria toxin/transcription factors/cytochrome f
_2.003 d1kum__ 1 0 1 1 0 0 0 0 0 0 Prealbumin-like
_2.004 d1hoe__ 0 0 0 0 0 0 0 0 0 0 alpha-Amylase inhibitor
_2.005 d1aac__ 2 4 2 0 1 3 0 0 0 0 Cupredoxins
_2.006 d1rsy__ 9 1 9 2 0 0 0 0 0 0 C2 domain-like
_2.007 d1npoa_ 0 0 0 0 0 0 0 0 0 0 Neurophysin II
_2.008 d2stv__ 0 0 0 0 0 0 1 0 0 0 Viral coat and capsid proteins
_2.009 d1dsl__ 0 0 0 0 0 0 0 0 0 0 Crystallins/protein S/yeast killer toxin
_2.010 d2sblb2 0 0 0 0 0 0 0 1 0 0 Colipase binding domain-like
_2.011 d1pgs_1 0 0 0 0 2 0 1 0 0 0 Glycosyl-asparaginase
_2.012 d1ecy__ 1 0 0 0 0 0 0 0 0 0 Ecotin, trypsin inhibitor
_2.013 d1gof_2 3 0 0 0 0 0 0 0 0 0 Galactose-binding domain-like
_2.014 d1ahsa_ 0 0 0 0 0 0 0 0 0 0 Segmented RNA-genome viruses' proteins
_2.015 d1knb__ 0 0 0 0 0 0 0 0 0 0 Adenovirus type 5 fiber protein, knob domain
_2.016 d1tnra_ 0 0 0 0 0 0 0 0 0 0 Tumor necrosis factor
_2.017 d1thw__ 0 0 6 6 0 0 0 0 0 0 Thaumatin
_2.018 d1jbc__ 0 4 15 13 0 1 1 0 1 0 ConA-like lectins/glucanases
_2.019 d1bgla4 3 0 0 0 0 0 0 0 0 0 Supersandwich
_2.020 d1nyf__ 4 18 34 19 3 1 0 0 0 0 SH3-like barrel
_2.021 d1lepa_ 14 13 9 0 3 3 2 0 2 1 GroES-like
_2.023 d1whi__ 1 3 2 1 1 1 1 1 1 1 Ribosomal protein L14
_2.024 d1snc__ 13 7 10 6 4 3 3 3 3 3 OB-fold
_2.025 d1prch1 0 0 0 0 0 0 0 0 0 0 near-membrane domain of membrane proteins
_2.026 d4fgf__ 0 1 10 9 1 0 2 0 0 1 beta-Trefoil
_2.027 d1fnb_1 7 10 13 1 8 8 4 4 3 3 Reductase/Elongation Factor Domain
_2.028 d1efua2 2 1 2 0 2 1 1 0 1 1 EF-Tu, Ct-dom.
_2.029 d1arb__ 0 0 2 2 0 0 0 0 0 0 Trypsin-like serine proteases
_2.030 d1bco_1 0 0 0 0 1 0 0 0 0 0 Mu transposase, Ct-dom.
_2.031 d1bmfa2 4 2 2 0 3 3 3 0 2 1 like F1 ATP synthase, a & b sub., A-dom.
_2.032 d1hvc__ 0 5 19 0 0 0 0 0 0 0 Acid proteases
_2.033 d2eng__ 0 0 0 0 0 0 0 0 0 0 Barwin-like endoglucanases
_2.034 d1gtra1 1 2 2 0 1 0 0 1 0 0 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
_2.035 d1mai__ 0 0 8 0 0 0 0 0 0 0 PH domain-like
_2.036 d1ytfc1 0 2 4 1 0 0 0 0 0 0 Transcription factor IIA (TFIIA), Nt-dom.
_2.038 d1pkn_1 2 2 3 0 1 2 0 1 1 1 Pyruvate kinase beta-barrel domain
_2.039 d1hbq__ 1 0 10 10 0 0 0 0 0 0 Lipocalins
_2.040 d1stp__ 0 0 0 0 0 0 0 0 0 0 Streptavidin-like
_2.041 d2cpl__ 2 8 16 0 1 2 1 0 0 0 Cyclophilin
_2.042 d1hxn__ 0 0 1 1 0 0 0 0 0 0 4-bladed beta-propeller
_2.043 d2sil__ 0 0 0 0 0 1 1 0 0 0 6-bladed beta-propeller
_2.044 d2bbkh_ 0 46 60 11 0 5 0 0 0 0 7-bladed beta-propeller
_2.045 d4aaha_ 2 0 0 0 0 1 0 1 0 0 8-bladed beta-propeller
_2.046 d1cdg_3 1 0 1 1 0 0 0 0 0 0 alpha-Amylases, beta-sheet domain
_2.047 d1hcb__ 0 0 6 6 0 0 0 0 0 0 Carbonic anhydrase
_2.048 d3bcl__ 0 1 1 1 0 0 0 0 0 0 Bacteriochlorophyl A protein
_2.049 d1vmoa_ 0 0 12 12 0 0 0 0 0 0 beta-Prism I
_2.050 d1jpc__ 0 0 0 0 0 1 0 0 0 0 beta-Prism II
_2.051 d1kapp1 0 0 1 1 0 5 0 0 0 0 beta-Roll
_2.052 d2pec__ 0 0 0 0 0 0 0 0 0 0 Single-stranded right-handed beta-helix
_2.053 d1lxa__ 2 1 0 0 2 2 2 1 0 1 Single-stranded left-handed beta-helix
_2.054 d1caua_ 2 1 12 4 2 10 0 0 0 0 Double-stranded beta-helix
_2.055 d1bdo__ 9 10 13 2 5 5 2 2 2 2 Barrel-sandwich hybrid
_2.056 d1dud__ 1 1 1 0 2 1 2 0 0 0 beta-clip
_2.057 d2kauc1 0 0 0 0 1 1 1 0 0 0 alpha-Subunit of urease, composite domain
_3.001 d1byb__ 45 36 53 12 13 22 11 10 5 4 TIM-barrel
_3.002 d1tml__ 0 0 0 0 0 0 0 0 0 0 Cellulases
_3.003 d1rlr_2 2 2 1 0 1 1 1 0 1 1 ribonucleotide reductase, R1 sub., Ct-dom.
_3.004 d2tmda2 15 11 17 2 7 10 1 9 5 5 FAD/NAD(P)-binding
_3.005 d1zyma_ 10 4 2 0 2 4 2 2 2 3 The "swivelling" beta/beta/alpha domain
_3.006 d1bta__ 0 0 0 0 0 0 0 0 0 0 Barstar (barnase inhibitor)
_3.007 d1bnh__ 0 0 2 2 0 0 0 0 0 0 Leucine-rich repeats
_3.009 d1rvva_ 1 1 0 0 1 1 1 1 0 0 beta-subunit (capsid) of the lumazine synthase/riboflavin synthase complex
_3.011 d1udh__ 1 1 1 0 1 0 1 0 1 1 Uracil-DNA glycosylase
_3.012 d1mla_1 1 0 3 1 1 1 1 0 0 0 Catalytic domain of malonyl-CoA ACP transacylase
_3.013 d3chy__ 49 8 8 2 14 57 12 5 0 1 Flavodoxin-like
_3.014 d1fnb_2 5 8 5 0 1 1 0 1 0 0 Ferredoxin reductase-like, C-terminal NADP-linked domain
_3.015 d2ts1_2 5 5 5 0 4 4 5 6 3 3 ATP pyrophoshatases
_3.016 d1dnpa2 1 1 0 0 0 1 0 0 0 0 Nt-dom. of DNA photolyase
_3.017 d2tmda3 2 0 2 2 0 0 0 0 0 0 A nucleotide-binding domain
_3.018 d1xel__ 60 46 99 13 23 40 19 7 4 3 NAD(P)-binding Rossmann Fold
_3.019 d1bnca2 4 5 5 0 2 3 1 1 0 0 Biotin carboxylase Nt-dom.-like
_3.020 d1pyda1 6 7 3 0 1 4 0 1 0 0 Pyruvate oxidase and decarboxylase, middle domain
_3.021 d1nbaa_ 3 0 0 0 0 0 0 0 0 0 N-carbamoylsarcosine amidohydrolase
_3.022 d1deaa_ 4 0 2 1 2 1 0 0 0 0 Glucosamine 6-phosphate deaminase
_3.023 d1pyda2 18 17 11 0 7 9 4 8 2 2 Thiamin-binding
_3.024 d1gky__ 20 69 140 8 17 19 17 16 10 11 P-loop Containing NTP Hydrolases
_3.025 d1chd__ 1 0 0 0 0 0 0 0 0 0 CheB methylesterase domain (C-terminal residues 152-349)
_3.026 d1sca__ 0 5 10 0 0 1 0 0 0 0 Subtilases
_3.027 d3cla__ 2 2 4 0 2 2 0 0 1 1 CoA-dependent acetyltransferases
_3.028 d1phr__ 2 1 0 0 0 1 0 0 0 0 Phosphotyrosine protein phosphatases I
_3.029 d2hnq__ 0 6 90 55 0 0 0 0 0 0 (Phosphotyrosine) protein phosphatases II
_3.030 d1srx__ 7 13 55 32 4 10 2 0 1 1 Thioredoxin-like
_3.031 d1trka3 2 2 0 0 1 1 1 1 1 1 Transketolase, Ct-dom.
_3.032 d1pkm_3 2 2 3 0 1 1 0 0 0 0 Pyruvate kinase, Ct-dom.
_3.033 d1lcpa1 0 0 0 0 0 0 0 0 0 0 Leucine aminopeptidase, Nt-dom.
_3.034 d1htta1 1 0 0 0 1 1 0 1 0 0 An anticodon-binding domain of Class II aaRS
_3.035 d1bam__ 0 0 0 0 0 0 0 0 0 0 Restriction endonucleases
_3.036 d1gdr__ 3 0 0 0 0 0 0 0 0 0 gamma,delta resolvase, large fragment
_3.037 d1pdo__ 2 0 0 0 0 0 0 0 0 0 The IIA domain of mannose transporter, IIA-Man
_3.038 d2rn2__ 24 54 52 0 15 11 4 0 4 5 Ribonuclease H-like motif
_3.039 d1tfr__ 2 0 0 0 1 1 1 0 1 2 5' to 3' exonuclease
_3.040 d3pgm__ 3 5 16 16 1 2 0 0 0 0 Phosphoglycerate mutase-like
_3.041 d1opr__ 3 3 4 1 3 3 1 3 1 1 Phosphoribosyltransferases (PRTases)
_3.042 d1zon__ 0 0 5 5 0 0 0 0 0 0 Integrin A (or I) domain
_3.043 d1cde__ 4 1 2 0 2 3 1 0 1 1 Glycinamide ribonucleotide transformylase
_3.044 d1vid__ 2 1 3 2 3 5 6 4 2 0 SAM-dependent methyltransferases
_3.045 d1ama__ 15 6 9 0 4 3 2 3 0 0 PLP-dependent transferases
_3.046 d1gpma2 4 5 2 0 5 4 3 3 0 0 Class I glutamine amidotransferases
_3.047 d1ulb__ 4 2 3 1 3 1 2 1 1 1 Purine and uridine phosphorylases
_3.048 d2ace__ 6 9 79 64 2 12 0 0 3 3 alpha/beta-Hydrolases
_3.049 d1masa_ 3 1 2 0 0 0 0 0 0 0 Purine nucleoside hydrolase
_3.050 d2ctb__ 4 4 16 5 1 2 1 0 1 1 Zn-dependent exopeptidases
_3.051 d1ra9__ 1 1 1 0 1 0 0 0 2 1 Dihydrofolate reductases
_3.052 d1gtma2 1 2 1 0 1 1 1 0 0 0 Aminoacid dehydrogenases, dimerisation domain
_3.053 d1fua__ 5 0 2 2 3 0 0 1 1 0 Class II aldolase
_3.054 d1alka_ 1 1 0 0 0 0 0 0 0 0 Alkaline phosphatase
_3.055 d1xaa__ 3 6 4 0 1 2 1 2 0 1 Isocitrate/isopropylmalate dehydrogenases
_3.056 d2at2a_ 8 4 2 0 2 4 2 4 2 0 Asp-carbamoyltransferase, Cat.-chain
_3.057 d1ttqb_ 1 2 1 0 1 1 1 2 0 0 Tryptophan synthase, beta-subunit
_3.058 d2ora_1 4 3 9 9 0 0 0 0 0 0 Rhodanese
_3.059 d7acn_2 4 4 2 0 1 2 1 2 0 0 Aconitase, first 3 domains
_3.060 d3pmga1 5 7 3 0 4 6 3 2 1 1 Phosphoglucomutase, first 3 domains
_3.061 d3pgk__ 1 1 1 0 1 1 1 1 1 1 Phosphoglycerate kinase
_3.062 d1mioa_ 0 0 0 0 0 2 0 1 0 0 Nitrogenase iron-molybdenum protein, alpha and beta chains
_3.063 d2bgu__ 2 1 2 0 1 2 0 0 0 0 beta-Glucosyltransferase & glycogen phosphorylase
_3.064 d1agx__ 2 5 1 1 1 0 1 1 0 0 Glutaminase/Asparaginase
_3.065 d3pfk__ 1 2 2 0 1 2 0 0 1 1 Phosphofructokinase
_3.066 d1ayl__ 1 1 0 0 1 0 0 0 0 0 Phosphoenolpyruvate carboxykinase (ATP-oxaloacetate carboxy-liase)
_3.067 d2dri__ 23 0 0 0 6 3 0 1 0 0 Periplasmic binding protein-like I
_3.068 d1lst__ 25 1 0 0 10 17 4 2 0 0 Periplasmic binding protein-like II
_3.069 d1pxta1 10 4 10 0 2 2 2 1 0 0 Thiolase
_3.070 d1ctt_1 2 1 2 0 2 0 0 0 1 1 Cytidine deaminase
_4.001 d1fus__ 0 0 0 0 0 0 0 0 0 0 Microbal ribonucleases
_4.002 d2baa__ 4 0 4 4 4 1 3 0 0 0 Lysozyme-like
_4.003 d2act__ 0 1 29 29 0 0 0 0 0 0 Cysteine proteinases
_4.004 d7rsa__ 0 0 0 0 0 0 0 0 0 0 Ribonuclease A-like
_4.005 d2kaua_ 0 0 0 0 1 1 1 0 0 0 Urease, gamma-subunit
_4.006 d3il8__ 0 0 0 0 0 0 0 0 0 0 Interleukin 8-like chemokines
_4.007 d1pmd_1 0 0 0 0 0 0 0 0 0 0 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
_4.008 d1sso__ 0 0 0 0 0 0 0 0 0 0 histone-like proteins from arhaea
_4.009 d1kpaa_ 3 4 4 1 3 1 2 1 1 1 HIT-like
_4.010 d1dar_3 2 2 2 0 2 4 2 1 2 2 Ribosomal protein S5 domain 2-like
_4.011 d1igd__ 10 8 13 5 4 8 2 2 2 1 beta-Grasp
_4.012 d3cox_2 1 1 4 3 0 0 0 0 0 0 FAD-linked reductases, Ct-dom.
_4.013 d1dvc__ 2 0 1 1 0 0 0 0 0 0 Cystatin-like
_4.014 d1tmca_ 0 0 0 0 0 0 0 0 0 0 MHC antigen-recognition domain
_4.015 d1aak__ 0 14 21 2 0 0 0 0 0 0 Ubiquitin conjugating enzyme
_4.016 d1ema__ 0 0 0 0 0 0 0 0 0 0 Green fluorescent protein
_4.018 d1fkd__ 5 4 7 0 4 1 2 2 1 2 FKBP-like
_4.019 d1dhy_1 0 0 0 0 0 0 0 0 0 0 Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
_4.020 d1mkaa_ 2 0 0 0 2 1 1 0 0 0 beta-Hydroxydecanol thiol ester dehydrase
_4.021 d1egl__ 0 0 0 0 0 0 0 0 0 0 CI-2 family of serine protease inhibitors
_4.022 d1tfe__ 2 0 2 2 2 2 2 0 2 2 Elongation factor Ts (EF-Ts), dimerisation domain
_4.023 d1mnga2 2 1 2 0 1 1 1 0 0 0 Fe,Mn superoxide dismutase (SOD), Ct-dom.
_4.024 d1ctf__ 1 1 1 0 1 1 1 0 1 1 Ribosomal protein L7/12, Ct-dom.
_4.025 d2reb_2 1 0 0 0 1 1 1 0 0 1 Anti-LPS factor/recA domain
_4.026 d1stu__ 2 3 2 1 1 2 2 1 1 1 dsRBD & PDA domains
_4.027 d1vih__ 0 1 2 1 0 0 0 0 0 0 KH-domain
_4.028 d1gpma3 1 1 1 0 1 1 1 1 0 0 GMP synthetase, the C-terminal, dimerisation domain
_4.029 d1onea2 2 5 1 0 1 1 1 1 1 1 like Enolase, Nt-dom.
_4.030 d1oela3 0 0 0 0 0 0 0 0 1 1 The intermediate domain of GroEL
_4.031 d1fxd__ 37 28 46 10 18 16 12 40 3 3 like Ferrodoxin
_4.032 d1vhh__ 1 0 0 0 0 0 0 0 0 0 Hedgehog/DD-peptidase
_4.033 d1tig__ 3 1 0 0 3 3 2 1 1 1 IF3-like
_4.034 d1kpta_ 0 0 0 0 0 0 0 0 0 0 Virally encoded KP4 toxin
_4.035 d3rubs_ 0 0 0 0 0 1 0 0 0 0 RuBisCO, small subunit
_4.036 d1dcoa_ 1 1 1 1 1 1 0 0 0 0 DCoH-like
_4.037 d2chsa_ 0 0 0 0 0 1 0 0 0 0 Chorismate mutase
_4.038 d1fim__ 0 0 2 2 0 0 1 0 0 0 Tautomerase/MIF
_4.039 d1gado2 6 4 5 0 3 4 4 1 1 1 like G3P dehydrogenase, Ct-dom
_4.040 d1oaca4 1 0 0 0 0 0 0 0 0 0 Copper amine oxidase, domain 1
_4.041 d3ssi__ 0 0 0 0 0 0 0 0 0 0 Subtilisin inhibitor
_4.042 d1msc__ 0 0 0 0 0 0 0 0 0 0 RNA bacteriophage capsid protein
_4.043 d3grs_3 4 3 4 0 2 2 1 1 2 2 FAD/NAD-linked reductases, dimer-dom.
_4.044 d1srsa_ 0 4 2 0 0 0 0 0 0 0 Serum response factor (SRF) core
_4.046 d1ast__ 0 0 50 50 0 0 0 0 0 0 Metzincin-like
_4.047 d1ayd__ 0 0 23 8 0 0 0 0 0 0 SH2-like
_4.048 d2hpr__ 4 0 0 0 2 0 0 0 1 1 Histidine-containing phosphocarrier proteins (HPr)
_4.049 d1iba__ 7 0 0 0 0 0 0 0 2 2 Glucose permease domain IIB
_4.050 d1gtpa_ 2 1 2 1 2 2 1 0 0 0 Tetrahydrobiopterin biosynthesis enzymes
_4.051 d1puc__ 0 1 2 0 0 0 0 0 0 0 Cell cycle regulatory proteins
_4.053 d1nef__ 0 0 0 0 0 0 0 0 0 0 Regulatory factor Nef
_4.054 d1cby__ 0 0 0 0 0 0 0 0 0 0 Mosquitocidal delta-endotoxin CytB
_4.055 d1srya2 8 9 7 0 7 8 9 3 6 6 Class-II-aaRS/Biotin Synthetases
_4.056 d1vil__ 0 0 4 2 0 0 0 0 0 0 Actin depolymerizing proteins
_4.057 d1pne__ 0 1 3 1 0 0 0 0 0 0 Profilin-like
_4.058 d1mut__ 3 0 2 1 4 3 1 1 0 0 Nucleoside triphosphate pyrophosphorylase (MutT)
_4.059 d3tms__ 1 1 0 0 1 0 0 1 1 1 Thymidylate synthase
_4.060 d1lba__ 0 0 0 0 1 0 0 0 0 0 Bacteriophage T7 lysozyme (Zn amidase)
_4.062 d1cyo__ 0 5 6 1 0 0 0 0 0 0 Cytochrome b5
_4.063 d1vcc__ 2 0 0 0 2 0 0 0 0 0 A DNA topoisomerase I domain
_4.066 d1orda3 5 0 0 0 1 0 0 0 0 0 Ornithine decarboxylase Ct-dom.
_4.067 d1smna_ 0 1 1 0 0 0 0 0 0 0 Endonuclease
_4.068 d1mat__ 4 2 1 0 3 6 4 2 4 3 Creatinase/methionine aminopeptidase
_4.069 d1cdwa_ 0 3 3 0 0 0 0 1 0 0 TBP-like
_4.070 d1mxa_1 3 6 15 0 3 3 3 0 3 3 S-adenosylmethionine synthetase. MAT
_4.071 d2pola1 3 2 2 0 3 3 2 2 1 0 DNA clamp
_4.072 d1alo_4 10 0 6 6 0 0 0 0 0 0 Aldehyde oxidoreductase, molybdemum cofactor-binding domain
_4.073 d1hqi__ 0 0 0 0 0 0 0 0 0 0 Phenol hydroxylase P2 protein
_4.075 d1div__ 1 0 0 0 1 1 1 0 1 1 Ribosomal protein L9
_4.076 d1gsa_2 6 8 10 0 3 7 3 5 0 0 ATP-grasp
_4.077 d1mbb_1 1 0 0 0 1 1 0 0 0 0 FAD-binding domain
_4.078 d1mbb_2 1 0 0 0 1 1 0 0 0 0 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, Ct-dom.
_4.079 d3dni__ 0 0 0 0 0 0 0 0 0 0 DNase I-like
_4.080 d1aora2 1 0 0 0 0 0 0 0 0 0 Aldehyde ferredoxin oxidoreductase, Nt-dom.s
_4.081 d1gdoa_ 3 15 15 0 2 2 1 6 0 0 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
_4.083 d1bmc__ 0 0 0 0 0 1 0 0 0 0 Zn metallo-beta-lactamase
_4.084 d1fjma_ 3 13 55 7 1 3 0 0 0 0 Metallo-dependent phosphatases
_4.085 d1mlda2 1 3 3 2 1 1 0 1 1 1 like LDH/MDH, Ct-dom.
_4.086 d1mrj__ 0 0 0 0 0 0 0 0 0 0 Ribosome inactivating proteins (RIP)
_4.087 d1dtp__ 0 0 0 0 0 0 0 0 1 0 ADP-ribosylation
_4.088 d1lit__ 0 1 94 94 0 0 0 0 0 0 C-type lectin-like
_4.089 d1pmd_3 1 0 0 0 1 0 1 0 0 0 Penicillin-binding protein 2x (pbp-2x), Nt-dom.
_5.001 d1hcl__ 0 110 344 5 0 7 0 0 1 1 Protein kinases (PK), catalytic core
_5.002 d1psi__ 0 0 9 9 1 0 0 0 0 0 Serpins
_5.003 d3pte__ 5 0 8 8 2 3 1 0 0 0 beta-Lactamase/D-ala carboxypeptidase
_5.004 d2cae__ 1 2 0 0 1 0 2 0 0 0 Heme-linked catalases
_5.005 d1tpt__ 1 0 0 0 0 0 0 1 1 1 Thymidine phosphorylase
_5.006 d1buca2 4 0 14 13 0 0 0 0 0 0 Acyl-CoA dehydrogenase (flavoprotein), N-terminal and middle domains
_5.007 d1imf__ 3 3 4 2 3 5 1 1 0 0 Sugar phosphatases
_5.008 d1mml__ 1 1 2 1 1 1 1 0 0 0 DNA/RNA polymerases
_5.009 d1rpl__ 0 1 0 0 1 0 0 0 0 0 Nucleotidyltransferases
_5.010 d1lgr__ 2 1 4 0 1 2 1 1 0 0 Glutamine synthetase
_5.011 d1ecl__ 2 1 2 0 2 1 2 2 1 1 type I DNA topoisomerase
_5.012 d1bgw__ 4 1 6 0 4 3 2 0 4 4 type II DNA topoisomerase
_5.013 d1daaa_ 2 0 1 0 0 2 0 1 0 0 D-amino acid aminotransferase
_5.014 d1frvb_ 4 0 0 0 0 1 2 3 0 0 Nickel-iron hydrogenase, large subunit
_5.015 d1frva_ 2 0 0 0 0 0 1 3 0 0 Nickel-iron hydrogenase, small subunit
_5.016 d1dkza_ 3 10 9 0 2 3 1 0 1 1 like HSP70, Ct-dom.
_5.017 d1jud__ 5 0 0 0 1 0 0 1 0 0 L-2-Haloacid dehalogenase
_7.001 d2gf1__ 0 0 0 0 0 0 0 0 0 0 Insulin-like
_7.002 d1etn__ 0 0 0 0 0 0 0 0 0 0 Heat-stable enterotoxin B
_7.003 d1hev__ 0 1 3 3 1 0 0 0 1 0 Knottins (Small inhibitors, toxins, lectins)
_7.004 d1pmc__ 0 0 0 0 1 0 0 0 0 0 Proteinase inhibitor PMP-C
_7.005 d3ebx__ 0 0 0 0 0 0 0 0 0 0 Snake toxin-like
_7.006 d1bpi__ 0 0 34 33 0 0 0 0 0 0 BPTI-like
_7.007 d1bnb__ 0 0 0 0 0 0 0 0 0 0 Defensin-like
_7.008 d1ans__ 0 0 0 0 0 0 0 0 0 0 Neurotoxin III (ATX III)
_7.009 d1ldl__ 0 0 19 18 0 0 0 0 0 0 Ligand-binding domain of low-density lipoprotein receptor
_7.010 d1ixa__ 0 0 63 61 0 0 0 0 0 0 EGF/Laminin
_7.011 d1cbn__ 0 0 0 0 0 0 0 0 0 0 Crambin-like
_7.012 d1krn__ 0 0 1 0 0 0 0 0 0 0 Kringle modules
_7.013 d1tur__ 0 0 3 3 0 0 0 1 0 0 Ovomucoid/PCI-1 like inhibitors
_7.014 d2pspa1 0 0 0 0 0 0 0 0 0 0 Trefoil
_7.015 d1tgj__ 0 0 5 5 0 0 0 0 0 0 Cystine-knot cytokines
_7.016 d1hfi__ 0 0 1 1 0 0 0 0 0 0 Complement control module
_7.017 d1tcg__ 0 0 0 0 0 0 0 0 0 0 mu-conotoxin
_7.018 d1bgk__ 0 0 0 0 0 0 0 0 0 0 Sea anemone toxin k
_7.019 d2ech__ 0 0 2 2 0 0 0 0 0 0 Blood coagulation inhibitor (disintegrin)
_7.020 d1edn__ 0 0 0 0 0 0 0 0 0 0 Endothelin-like
_7.021 d2hir__ 0 0 0 0 0 0 0 0 0 0 Thrombin inhibitors
_7.022 d2bbkl_ 0 0 0 0 0 0 0 0 0 0 Methylamine dehydrogenase, L-chain
_7.023 d1pdc__ 0 0 0 0 0 0 0 0 0 0 Fibronectin type II module
_7.024 d1ata__ 0 0 12 12 0 0 0 0 0 0 Ascaris trypsin inhibitor
_7.025 d1exta1 0 0 1 0 0 0 0 0 0 0 Tumor necrosis factor (TNF) receptor
_7.026 d1afp__ 0 0 0 0 0 0 0 0 0 0 Antifungal protein (AGAFP)
_7.027 d1cfi__ 0 0 0 0 0 0 0 0 0 0 GLA-domain
_7.028 d2cy3__ 0 0 0 0 0 0 0 0 0 0 Cytochrome c3
_7.029 d1hip__ 0 0 0 0 0 0 0 0 0 0 HIPIP (high potential iron protein)
_7.030 d1ard__ 0 55 64 11 0 0 0 2 0 0 Classic zinc finger
_7.031 d125d__ 0 46 0 0 0 0 0 0 0 0 Zn2/Cys6 DNA-binding domain
_7.032 d1hcp__ 0 9 252 247 0 0 0 0 0 0 Glucocorticoid receptor-like (DNA-binding domain)
_7.033 d2znf__ 0 1 4 0 0 0 0 0 0 0 HIV zinc finger-like domains
_7.034 d1mea__ 3 5 5 0 1 1 0 6 0 0 Rubredoxin-like
_7.035 d1rie__ 0 2 2 1 0 4 1 0 0 0 Membrane-bound rubredoxin-like
_7.036 d1fre__ 0 0 0 0 0 0 0 0 0 0 B-box zinc-binding domain
_7.037 d1chc__ 0 16 23 20 1 0 0 0 0 0 RING finger domain
_7.038 d1mhu__ 0 2 0 0 0 0 0 0 0 0 Metallothionein
_7.039 d1adn__ 1 0 0 0 0 0 0 0 0 0 Ada DNA repair protein, Nt-dom. (N-Ada 10)
_7.040 d1ptq__ 0 1 8 2 0 0 0 0 0 0 Protein kinase cystein-rich domain (cys2)
_7.041 d1adt_2 0 0 0 0 0 0 0 0 0 0 ADDBP Zn-binding domains of ADDBP
_7.042 d1tpm__ 0 0 0 0 0 0 0 0 0 0 Fibronectin type I module

Email: Mark.Gerstein@yale.edu