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Analysis of Yeast Protein Kinases Using Protein Chips


Sixty two kinases exhibited substrate specificity on a particular substrate with specificity index (SI) greater than or equal to 2, and reciprocally, most substrates are preferentially phosphorylated by a particular protein kinase or set of kinases. SI was calculated using the following formula:

SIir = Fir / [(Fi1 + Fi2 + ... + Fir ) / r]

Where i represents the ID of a kinase used, r represents the ID of a substrate, and Fir represents the fold increase of a kinase i on substrate r compared with GST alone.

Download Table

Protein Kinase Substrate Specificity (log fold increases)
KinaseAutoAxl2CaseinpolyEYGic2HistoneHog1MBPMek1Rad9Red1Swi6Hsl1Tub4Ptk2Hog1DGST
YAL017W0.8462231190.9827711761.0189273030.8360102940.8477379270.748611831.2673168851.0521580131.1880443540.5654035321.0351493861.6401116640.7698104191.1016353141.267782091.266851680.565455016
YAR018C0.9354294440.7117678910.6887860921.0860018170.5569513220.3484771371.5678967290.9787141951.3244179251.1410810730.5472609670.8209152950.7631814551.1687417241.5679541151.5678393421.224583477
YAR019C0.6439196780.8294046620.7757947190.8797291270.9886375710.5881984191.1263302771.211775360.959987351.0234014421.0767836962.253722540.6886750721.0988479351.1286520341.1240085190.602131598
YBL016W0.7050982090.6637258590.7154184841.177352711.4760549290.8296015250.909032090.967288510.7646103812.1422088241.1191730191.2385478330.4755148641.238492460.9039801740.9140840070.759816122
YBL105C1.7651530920.7274166080.8678479422.1349461770.8292626280.7092044021.1666130071.0670413790.981419320.9636016230.8655752641.0186858930.3538078851.1853419641.1424846911.1907413220.030856804
YBR028C0.5413451670.6694457410.4902020960.8916037691.9601867340.4302221431.0502530851.0660937011.2981380892.8283966820.6966377581.3412398850.5592971461.0288018291.0344578511.066048320.047630003
YBR059C0.8187607460.782013291.6852971930.7915157190.9104077640.7744566031.3993197141.0836650170.5913092971.4450107020.9017323560.8738807030.8831627041.2226616111.3900154291.4086240.038167153
YBR079W0.1839280650.7614036780.7196629420.6745463170.6639135380.3553890451.4524449411.4144146850.7755232522.4812270842.0643107850.6653207960.8122920050.970202351.465392271.4394976130.100530633
YBR136W0.548535313.5729538091.7499544120.3935103660.2739974520.4038117511.6536441250.7348835480.9618308030.929896480.5876260430.4109651540.8483663890.4581503121.6632866521.6440015980.164585796
YBR160W0.4672378361.1130482670.9745853480.6835445740.7157102070.8809614391.4754860471.1384123910.8711444810.9462019971.3718249960.8829696921.0277058941.4168614051.4781911031.4727809910.083333333
YBR274W1.7353764970.6550902690.6665020260.671383871.2504731820.9672231291.6790697430.6592038241.0551220141.1146478360.7037550710.9370234140.4694304061.0414730331.6894206131.6687188740.0360862
YCL024W0.5384169230.88174191.0104273560.7285381610.8396267582.2275177491.3181118231.1564689210.7810537530.7538167920.9779508291.1305776970.5304036311.1587128141.3337700791.3024535660.330411249
YCR008W0.3890496910.5138576750.7491237430.5221840911.2490515540.6949055431.1226680730.9127459311.3022239360.9901432410.5939844990.991543150.6287825493.5392421871.1446096981.1007264480.555157991
YCR073C1.2841762450.5325121491.1440017290.2932790450.3662187470.2394209121.5794153840.6284252261.268181732.4702779372.3720361850.8375436060.2525525680.5557275431.5713846441.5874461240.017400225
YCR091W0.5748262870.4067357931.3544780140.7372031460.4340520340.0308278931.6746470971.2740679930.772858231.3073608620.9407382550.9699569781.7740513751.2326023181.6611658291.6881283640.166299531
YDL017W0.682839430.6023706890.5238519120.9456799330.8524591090.3856666841.8963545191.2844315560.8135125931.6600551880.4614231840.9642407060.8251405521.2988140031.9112681911.8814408480.010450904
YDL025C0.7829288870.879204950.8275441420.9573361020.6761900640.6302950571.7206793371.0316276511.0849739460.8992775520.9806607770.7748381230.8458140711.1405268041.7265164581.7148422160.326743863
YDL028C0.6566935891.2240008311.0987064181.0550732641.1298224770.9609146871.0728442350.9583356410.9484829931.0126961181.1917823841.0370074940.9671605211.1161321451.1824173890.9632710810.424658732
YDL079C1.7703480430.8449578460.8706565340.6685843260.7944584180.3526131271.2754553021.7813805730.6896609370.9424485960.8248361821.8597304420.5932514980.9188066681.2799730431.270937560.261900904
YDL101C0.9926768181.1609463330.9838229181.6467530480.7293160040.8769560821.0958492730.922333550.9510108990.8965822331.0607609080.8935609710.9411063451.021065941.1426667451.0490318010.635560132
YDL108W0.6809170430.5531045810.898935710.8023019781.1209693710.5321199271.6946102180.7988506271.1192677811.8872196420.8266670340.7962299150.6133313650.9012235061.8749027671.5143176690.385030866
YDL159W0.7261387040.5227878890.9428866321.035421042.1865505210.4066819351.0733200950.8840063120.8735270251.7885356970.8630617280.9901635870.5789024251.0648370391.0393096821.1073305090.91653918
YDL214C0.8996389611.0458034871.142530740.893222480.9844012360.6352332161.410835050.9602200871.4620217461.1699106621.2020076580.9402111270.5598720670.8232061751.3975363211.4241337790.049215207
YDR052C0.7346310260.6055944940.9355026620.7520290980.5518946820.5362800431.6315355350.9561753830.7990391741.3564784780.8835269840.8661008350.708460471.0214282611.6449809631.6180901061.398251806
YDR122W1.076807010.957509430.631615510.8624346850.7063724762.3042999331.0230295220.8453452681.6527760910.9559085060.7333088091.4619926080.630071040.7628294711.0214600941.0245989490.349640596
YDR247W 0.8076484260.8337221561.5705882790.8677669441.0254540111.3286853720.864906670.7948366940.8980496591.2137246151.0078585751.9471013780.3885601810.9950222830.8758415240.8539718170.726261416
YDR466W0.7118961210.3734820291.1900058561.4254485751.0230572671.2613087040.6794445831.102629651.6679511151.2203703561.6595470931.3631534090.3391331031.4293031030.6747976040.6840915610.194379871
YDR477W0.6554386980.6161576030.7927341360.803314470.6802234180.9397300071.7108235511.135026540.8821746821.2881135540.6393187871.0548700960.8644733690.9023531381.7191835161.7024635850.61360085
YDR490C1.186764330.625483070.8624623840.8465461840.6374292820.7188409581.4796713931.4130542790.8414649881.9324821850.885026010.6792693050.6884429021.1159248431.4575118931.5018308930.1277951
YDR507C0.8338757590.5924152120.9693684680.9525463830.7291581241.0153816791.3575755471.0389793950.8823848790.9946292550.8510831491.4934518360.8801956671.1088299181.3596206641.3555304290.584973636
YDR523C0.6072594120.9917470720.7003404690.8749635650.5813605910.4949331141.5122071060.9382523841.0817410921.7957170270.7930416241.0791782191.464608250.9262023241.5008905571.5235236540.134033539
YER123W0.9632169130.7931668950.8819960790.9742874261.0195274920.9366379631.1967330761.0243379540.9693715431.5204812931.0241779630.8859337330.979678691.0760714611.2839580371.1095081140.360915366
YER129W0.6827708261.7980483070.7002436880.7381016660.6954112570.6415308291.3421980890.9539786841.7055737470.8065608350.8177057211.2251813590.8304128671.0275354551.3362749941.3481211850.35035049
YFL029C1.909163131.3575124750.8621798550.8458691850.6976673010.8332842581.3933571020.8502275940.8535584950.9405194770.795265350.871036640.6718552230.9927114681.3863702931.4003439110.339078243
YFR014C1.1284593050.9894046421.0340551830.9492650341.1412749541.1268620780.9007819410.8786799961.1944455441.0343886441.2102916081.1041421540.8291438031.3283566811.0104255460.7911383360.348884551
YGL059W1.3415322820.7538106240.9891323641.0641434350.8306039860.5375012431.2499683810.876473450.9787818311.4221233630.9615331131.2121451990.8750661250.9571403561.2415070891.2584296730.450107486
YGL158W0.657022290.8661977121.7788658430.8541779080.7463231760.6055810471.0345197441.4501564541.1423793332.3195740020.8592172920.8617490920.709791920.8418586651.0223588341.0466806540.203546032
YGL179C0.8214369360.6276445611.2516865460.8071967060.8329827050.7516854431.1690490220.9558578250.9665560931.3785512811.9529843240.97595991.1764611560.8293713921.1519153491.1861826940.164478067
YGL180W0.7870431190.9436176420.8379225550.9258416860.8498251080.7821759461.7886881461.0509248931.0778821950.9392373360.8133780430.8503387390.722154750.8440299421.7994859481.7778903450.209563606
YGR040W0.3984125320.5368253460.7307332191.4563705520.9350188320.9484610221.4523012551.0975855261.2215160371.3939565090.7918307231.0691653891.0133912570.9322257711.4497681521.4548343580.117603517
YGR052W0.4806643340.7266512410.7407022450.8123983410.797561310.8258911032.1396305520.8824215740.7978041621.1250102790.7460287120.6370896491.2225109870.7003215582.1570397442.1222213590.086052849
YGR080W0.3986987240.2227099941.349792210.9011233570.4964396110.4811232531.2452033230.9313090430.9133742531.2531532490.81304810.8316021170.7537291192.1736576091.2362553621.2541512841.744629393
YGR092W1.3215034061.0287711311.1207847550.6396629870.5205628280.4903688911.4790952511.2136175630.8747134771.1964569760.8640605770.8866645170.8081009851.1072536041.4875149171.4706755840.490192551
YGR188C0.4712719060.8494454490.7303478133.1404641741.0346433270.4534028351.3779849991.235622261.0081249720.9478451710.820135390.5557006230.7532386460.8126775691.3762645191.3797054780.053124869
YGR262C 0.7345824860.9857500471.1262215080.8153532070.7147669020.6337749851.5774300310.9773137221.1818035421.0701570460.9249755580.765510191.3716623940.7664234781.5713697591.5834903040.199414842
YHL007C1.0510590871.1863358810.9471005930.8939362650.9225529551.0036244321.0730270710.998563480.9551747871.1623607451.157109211.0262390931.0896427531.2494275191.2036364350.9424177070.137791987
YHR030C0.7843709110.981541170.5119794450.8876761581.6557628240.5917125541.4962406180.9244092340.9534200071.0238922440.7968403220.6362281521.4651142070.9659478931.4926215691.4998596660.332383025
YHR079C0.7480797051.6341884470.8535134330.9029109581.4834622061.1105323761.032893050.7066018780.7826206122.1110618550.8092384390.6313652220.5839698930.6833754931.0301330461.0356530540.860400331
YHR082C0.8646127470.9631715510.8001178661.0703295950.8899483860.8457730811.0653796571.0082172131.8742913340.9104776911.1100393320.8240062721.0069237751.0779780171.06138671.0693726140.557974171
YHR102W1.5657642910.9403413870.7658815770.7922736130.7225016630.7759824911.1883718711.0698186911.0544959890.9953106171.0168018130.9607607550.9290592861.0133589921.1867549391.1899888020.832533223
YHR135C1.049669011.0829312710.9921704450.962056720.939949850.9104130861.0284665010.8801907960.9624503331.0217028641.1030064370.9686748951.109900991.1359932851.1536519310.903281070.795490515
YHR205W1.5813489330.8189135230.641871110.6915836571.6459286771.0046399031.2346790940.9246814470.8710295121.0624913410.8107241160.98388671.1553911890.9188824751.2358397781.2335184090.184590137
YIL035C0.6620717881.0376075140.8557179261.5839653780.8477546690.7281398211.4436309020.9696029690.8702833780.8750482351.2798105150.815782770.9326887071.1554150371.4476625871.4395992170.055218588
YIL042C0.7759448740.9034313440.6348700721.6166789741.028031790.9843348221.3483177550.8024457490.9904235990.9923573021.0070045561.4106912611.0538454550.7313446941.3533549511.343280560.02364224
YIL095W1.0665216460.9232436370.8199365690.8236670781.0134765340.4249826471.3279570810.7213294441.1515000042.6074621810.8269083240.8993944460.8951618520.7878434221.3260573921.3298567690.054700973
YIL147C1.9777339211.0595913221.1397628850.5299675530.6414747470.5698938641.4904968270.9494841430.9880667130.909940510.8861192550.8683677721.0274914180.8869081181.4881788241.492814830.093707298
YJL006C0.8089558320.5378685960.696449411.4040528780.4118124150.741589781.3259416151.0392651.1013132320.6574101940.7113873650.8610290690.8257872243.2056159731.3231358481.3287473830.019638184
YJL057C0.3997756890.2100816070.6097003350.8647920641.5425460930.1072487932.2149913010.9819783411.4073210260.8953272250.9179468951.0744789620.5278431040.7857559882.2303509792.1996316230.030229977
YJL095W1.1100732190.4930040120.9110810880.9205535321.4989567970.7231831881.6383753810.7952474271.0077630060.8511067080.9968535840.5895834730.491043231.0531127591.6414637651.6352869980.643311834
YJL106W0.8595499310.8583029630.8536406661.0032355390.8794752680.9084003381.2485200461.2037213231.0239465410.9024325011.0610037250.8494637331.1893838091.238135121.2505177171.2465223750.423748403
YJL128C0.5799811590.7974365060.6280829352.5225439730.7959327570.3849434411.0001998640.7449663141.5513361590.9169464270.5358547591.5643982260.8316376850.6867894720.9969374681.003462261.458550595
YJL141C0.9188434661.3342265440.9597837290.9286181520.6387588120.8975492771.2003962581.0095422131.0099572351.017164461.1393290831.0076938271.0523286560.9924008331.2807018461.120090670.49261494
YJL164C1.7211419681.7476148020.8416223260.7326139250.4641291220.5791243041.2037440861.3171141841.5322606120.9115878661.3084397210.7407014150.782922370.6883767891.2061963091.2012918620.021118339
YJL165C2.0804247420.9882428970.7959870330.7429279551.3643436550.5536621741.1872755990.9721050421.3958592581.7526858610.6455613380.6785515570.7931754770.6391840281.1808814131.1936697850.035462185
YJL187C0.8325324571.1502970680.8349757181.3197507160.5856393680.7814358251.423452641.995311550.9343992860.8042950080.8861540540.6843710850.9685883880.7242666621.4256752591.4212300210.227624897
YJR059W0.4964778142.1720167240.5163626930.986198470.912273070.3405706531.9632588330.7039244290.8176776650.7849046010.7481782880.2553363321.6016691490.6833672181.9726336541.9538840110.091266394
YKL048C0.5746007220.6121351581.5259819170.962975410.9328081270.1673159542.0256575221.0221793040.9369753251.2629803210.6983289380.4507183260.8407811220.8984733962.04567972.0056353440.036773413
YKL101W0.5501047211.0411186230.5886425710.9009629321.0060857340.6845097471.396863270.9734553570.8332604910.8623408090.8096894790.8492775550.9933982162.6116405271.4035655881.3901609520.104923427
YKL116C0.2380439382.022208680.4570847660.4764783770.4983411861.0842040661.2736614161.0698809571.6419064592.9631249410.5715995550.8118748750.7965018350.5097359051.2794579891.2678648440.03803021
YKL126W0.9058294490.9622687690.8112499350.8248540180.7093575460.9019353811.2215815411.5006053960.8982862191.4357068630.9950298220.8945021830.9588240261.4334934691.2256300561.2175330260.103312302
YKL139W0.4893404330.5853747560.9020492172.6668920110.4313202550.3230550521.6782739060.8919417980.7151478160.9274938960.8798940970.7824789430.6906588461.3893890311.6919728581.6645749540.290142131
YKL161C0.633121190.7131582931.9291963960.8111058680.3732562830.6198823961.4599624781.1434083260.8137407681.6353085231.056143260.7383142450.9950699780.8947251.4633192911.4566056650.263682039
YKL166C0.4430738710.6844481720.6264549410.5831239530.5735005212.0684604611.3739034660.8404480410.6797254821.1594262042.8201198390.6547984560.5648505791.0698504821.3770085451.3707983860.110008601
YKL168C 1.6113616740.5620341550.5535661690.6138253520.8712459880.6708780161.5986101121.1249988011.6602093141.6055724460.6275362680.7207779980.926406790.6446660331.5800938921.6171263310.011090662
YKL171W0.8988384580.8059620291.0231194520.8872928841.0363851740.9925979741.0802518371.0207884411.0755036481.0722806851.1004371051.0605326720.8047107971.3997710541.086868551.0736351230.581024116
YKL198C0.7726111820.5988317040.8622721141.0186584080.759917721.2140318971.1107282091.3375817681.1462900610.9329008580.9938659961.0138521450.7636618261.4062974971.1149019651.1065544530.847042195
YLL019C0.7801709720.8913777490.9556448220.9913113420.8058867731.1529067711.0257867231.098671220.9519279011.1340397151.2218642211.138506320.8999996441.2747017421.0261380161.0254354290.625630641
YLR096W1.0966885331.4856362720.9945397110.8741077710.8520001190.9361021851.1344448041.0386997190.9763259530.6735240461.1223385650.9169031610.9353044751.0329104351.1355499931.1333396140.661584643
YLR113W0.5423915841.4830409850.9004959561.0154175280.4788864140.4661759511.6411940221.0659725271.1261516770.9764650191.6051748690.8128308820.6534292360.9066309751.6413540671.6410339770.043354331
YLR248W0.840339670.7977135390.9460838270.9690427311.0306335070.9812599141.1238911081.0730445340.9458588450.8489273841.0115011171.07115810.8131562531.756379141.1275271821.1202550340.543228115
YLR362W0.3630263170.8050806453.3322386520.5328999470.6537741430.0816782711.5642134491.1483236880.9423801440.6129456190.9169405991.5785358030.7291836490.6034584561.5666819261.5617449720.00689372
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Paul Bertone
6/15/00