YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Report on PDB Structure 8adh

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d8adh_1.   Domains not shown. d8adh_2.
The top-five ranked attributes:
  C(refg)
P-value (seq. DE)
N(foldonly)
P-value (seq.)
X(size)
fluctuation of expression levels in development (worm)
G(hinf)
fold occurrence in Mtub
G(bbur)
fold occurrence in Mpne
value15..0e-014.01293
rank1791515
%ile98.296.895.895.695.6
The bottom-five ranked attributes:
  B (Ala,pdb100)
composition percentage of Tyr for pdb40d
I (pdball,inter)
composition percentage of Tyr for pdb100d
P (foldonly)
seq. identity (DE)
B (Arg,pdb100)
composition percentage of Gln for pdb100d
B (Arg,pdb40)
composition percentage of Gln for pdb40d
value 1.1 1.0 13.07 1.5 1.2
rank 376 393 53 398 392
%ile 7.8 6.4 5.4 5.2 3.9
  Interaction report for 8adh.

  Genome Occurrence.   Domain d8adh_1.   Domains not shown. d8adh_2.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro
Fold 1 0 0 2 22 13 2 4 20 16 29 4 2 1 5 1 1 1 1 1
Superfamily 1 0 0 2 22 13 2 4 19 12 29 4 2 1 5 1 1 1 1 1
  Function Classification Domain d8adh_1.   Domains not shown. d8adh_2.
 Augmented Flybase+ENZYMEGenProtECMIPS
d8adh_1E-1.1.1.1NO06.04

  Core Structure does not exist for 8adh.

  Alignments. Domain d8adh_1.   Domains not shown. d8adh_2.
  # Pairsuntrimmed RMStrimmed RMS%sequence identitystructure p-valuesequence p-value
Fold 18 8.94 2.26 27.22 9.81e-03 5..0e-01
Superfamily14 8.55 2.15 31.26 6.15e-05 3.57e-01
Family10 9.73 2.17 35.32 5.89e-06 2.00e-01
Fold only 4 10.33 2.64 13.07 4.39e-02 1
Sfam only3 6.46 2.65 16.15 2.67e-04 1

Scop information.
RCSB PDB information.