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Report on PDB Structure 3tms

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d3tms__.   No additional domains. 
The top-five ranked attributes:
  F(spor)
fluctuation of expression levels in diauxic shift
I(pdbb,all)
interaction with beta proteins on different chains [yeast]
F(alpha)
fluctuation of expression levels in CDC15
B(Ile,pdb100)
composition percentage of His for pdb100d
I(pdbab,inter)
interaction with alpha-beta proteins on same chains [pdb]
value0.5400.55.165
rank6471514
%ile97.097.096.696.495.6
The bottom-five ranked attributes:
  L (vegyou)
fold enrichment in wild type (J)
N (foldonly)
P-value (seq.)
I (scerab,all)
degree of rotation angle about hinge [Ave.]
J (pdbb,intra)
degree of rotation angle about hinge [Max.]
C (gal)
level galactose
value -1.0 8.87E-50 2.17 2.17 0.0
rank 202 207 99 99 211
%ile 5.2 4.2 2.0 2.0 1.9
  Interaction report for 3tms.

  Genome Occurrence.   Domain d3tms__.   No additional domains. 
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro
Fold 2 1 1 0 1 0 0 0 1 2 1 1 0 1 1 0 0 0 0 0
Superfamily 2 1 1 0 1 0 0 0 1 2 1 1 0 1 1 0 0 0 0 0
  Function Classification Domain d3tms__.   No additional domains. 
 Augmented Flybase+ENZYMEGenProtECMIPS
d3tms__E-2.1.1.453.3.01NO
  Core Structure exists in family 3tms based on alignment method ALI.
  Core Structure exists in family tms based on alignment method .
  Alignments. Domain d3tms__.   No additional domains. 
  # Pairsuntrimmed RMStrimmed RMS%sequence identitystructure p-valuesequence p-value
Fold 3 2.97 0.51 45.11 6.28e-27 8.87e-50
Superfamily3 2.97 0.51 45.11 6.28e-27 8.87e-50
Family3 2.97 0.51 45.11 6.28e-27 8.87e-50
Fold only 0 . . . . .
Sfam only0 . . . . .

Scop information.
RCSB PDB information.