Report on PDB Structure 3dap

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d3dapa1.   Domains not shown. d3dapa2, d3dapb1, d3dapb2.

The top-five ranked attributes:

G(mtub) fold occurrence in Bsub G(hinf) fold occurrence in Mtub E(gal) fold percentage in galactose G(syne) fold occurrence in Aaeo G(ecol) fold occurrence in Syne value 98 124 8.1 33 59 rank 1 1 1 2 3 %ile 99.7 99.7 99.5 99.4 99.1

The bottom-five ranked attributes:

B (Phe,pdb40) composition percentage of Glu for pdb40d I (scerab,intra) interaction with alpha-beta proteins [yeast] B (Phe,pdb100) composition percentage of Glu for pdb100d B (Arg,pdb100) composition percentage of Gln for pdb100d X (pseu) year of fold determined value 5.2 0 5.0 2.6 74 rank 309 102 335 337 417 %ile 24.3 22.7 20.2 19.8 0.7

Interaction report for 3dap.
Genome Occurrence.	Domain d3dapa1.	Domains not shown.	d3dapa2, d3dapb1, d3dapb2.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro Fold 31 16 26 19 72 132 33 59 79 98 126 25 21 4 5 5 5 10 10 9 Superfamily 31 16 26 19 72 132 33 59 79 98 126 25 21 4 5 5 5 10 10 9
Function Classification	Domain d3dapa1.	Domains not shown.	d3dapa2, d3dapb1, d3dapb2.
Augmented Flybase+ENZYME GenProtEC MIPS d3dapa1 E-1.4.1.16 NO NO
Core Structure does not exist for 3dap.
Alignments.	Domain d3dapa1.	Domains not shown.	d3dapa2, d3dapb1, d3dapb2.
# Pairs untrimmed RMS trimmed RMS %sequence identity structure p-value sequence p-value Fold 752 6.85 2.13 20.54 8.84e-03 8.02e-01 Superfamily 752 6.85 2.13 20.54 8.84e-03 8.02e-01 Family 66 9.50 3.71 32.04 6.45e-02 5.49e-01 Fold only 0 . . . . . Sfam only 530 6.52 2.08 16.87 1.14e-04 9.98e-01
Scop information.
RCSB PDB information.