Report on PDB Structure 1tbp

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d1tbpa1.   Domains not shown. d1tbpa2, d1tbpb1, d1tbpb2.

The top-five ranked attributes:

C(refg) P-value (seq. DE) F(heatec) fluctuation of expression levels in sporulation B(Cys,pdb100) interaction with alpha proteins [pdb] B(Ser,pdb40) interaction with alpha-beta proteins on different chains [pdb] I(pdbb,inter) interaction with alpha proteins on different chains [pdb] value 1 1.64 2 2 1 rank 1 4 10 15 16 %ile 98.2 97.9 96.3 94.4 94.0

The bottom-five ranked attributes:

J (pdball,intra) overall RMS between structures [Max.] I (pdball,intra) interaction types [pdb] J (pdba,inter) maximum energy difference [Ave.] J (pdball,all) maximum energy difference [Max.] I (scera,all) overall RMS between structures [Ave.] value 3.91 1 1166.20 1356.85 3.12 rank 95 303 96 96 98 %ile 5.9 5.0 5.0 5.0 3.0

Interaction report for 1tbp.
Genome Occurrence.	Domain d1tbpa1.	Domains not shown.	d1tbpa2, d1tbpb1, d1tbpb2.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro Fold 2 1 1 2 3 4 0 0 1 0 2 0 1 0 0 0 0 0 0 0 Superfamily 2 1 1 2 1 3 0 0 1 0 1 0 1 0 0 0 0 0 0 0
Function Classification	Domain d1tbpa1.	Domains not shown.	d1tbpa2, d1tbpb1, d1tbpb2.
Augmented Flybase+ENZYME GenProtEC MIPS d1tbpa1 D-1.2.9.1.1.1 NO 04.01.01
Core Structure does not exist for 1tbp.
Alignments.	Domain d1tbpa1.	Domains not shown.	d1tbpa2, d1tbpb1, d1tbpb2.
# Pairs untrimmed RMS trimmed RMS %sequence identity structure p-value sequence p-value Fold 13 4.81 0.89 27.99 5.08e-07 6.15e-01 Superfamily 9 4.75 0.64 33.56 2.83e-07 4.44e-01 Family 6 3.21 0.45 42.57 5.97e-09 1.66e-01 Fold only 4 4.93 1.43 15.46 1.01e-06 1 Sfam only 3 7.84 1.04 15.55 8.37e-07 1
Scop information.
RCSB PDB information.