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Report on PDB Structure 1nfk

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d1nfka1.   Domains not shown. d1nfka2, d1nfkb1, d1nfkb2.
The top-five ranked attributes:
  G(aaeo)
fold occurrence in Cele
B(Trp,pdb100)
interaction with beta proteins on different chains [pdb]
I(pdball,inter)
interaction on same chains [pdb]
I(pdbb,inter)
interaction with beta proteins on same chains [pdb]
I(pdball,intra)
interaction types [pdb]
value829396501403950
rank11111
%ile99.799.799.799.799.7
The bottom-five ranked attributes:
  B (Cys,pdb100)
composition percentage of Ala for pdb100d
I (scerall,inter)
interaction on same chains [yeast]
F (cdc15)
fluctuation of expression levels in CDC28
C (refg)
P-value (seq. DE)
X (pseu)
year of fold determined
value 5.7 0 0.13 9.99E-01 76
rank 342 112 109 52 403
%ile 18.6 15.2 13.5 7.1 4.0
  Interaction report for 1nfk.

  Genome Occurrence.   Domain d1nfka1.   Domains not shown. d1nfka2, d1nfkb1, d1nfkb2.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro
Fold 2 2 2 0 4 829 2 11 18 2 2 0 2 0 0 2 1 2 0 0
Superfamily 1 1 2 0 1 452 0 1 0 0 1 0 0 0 0 1 0 2 0 0
  Function Classification Domain d1nfka1.   Domains not shown. d1nfka2, d1nfkb1, d1nfkb2.
 Augmented Flybase+ENZYMEGenProtECMIPS
d1nfka1D-1.2.9.1.1.1NONO

  Core Structure does not exist for 1nfk.

  Alignments. Domain d1nfka1.   Domains not shown. d1nfka2, d1nfkb1, d1nfkb2.
  # Pairsuntrimmed RMStrimmed RMS%sequence identitystructure p-valuesequence p-value
Fold 17066 3.39 0.91 44.03 8.60e-03 2.27e-01
Superfamily15465 3.21 0.81 46.88 8.85e-03 1.49e-01
Family190 15.89 6.27 17.73 4.58e-01 9.40e-01
Fold only 1549 5.04 1.77 16.09 1.81e-03 9.99e-01
Sfam only1281 4.81 1.65 16.47 3.48e-03 9.88e-01

Scop information.
RCSB PDB information.