Report on PDB Structure 1hiv

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d1hiva_.   Domains not shown. d1hivb_.

The top-five ranked attributes:

I(pdbb,inter) interaction with beta proteins on same chains [pdb] I(pdbb,all) interaction with beta proteins on different chains [yeast] I(scerb,inter) interaction with beta proteins on same chains [yeast] I(scerb,intra) interaction with beta proteins [yeast] B(His,pdb100) composition percentage of Gly for pdb100d value 20 0 4 4 11.7 rank 9 4 5 5 20 %ile 97.2 97.0 96.2 96.2 95.2

The bottom-five ranked attributes:

B (Ile,pdb100) composition percentage of His for pdb100d B (Ser,pdb100) composition percentage of Arg for pdb100d B (Phe,pdb100) composition percentage of Glu for pdb100d B (Phe,pdb40) composition percentage of Glu for pdb40d B (Ser,pdb40) composition percentage of Arg for pdb40d value 0.9 2.4 3.6 3.6 2.3 rank 369 387 388 377 383 %ile 12.1 7.9 7.6 7.6 6.1

Interaction report for 1hiv.
Genome Occurrence.	Domain d1hiva_.	Domains not shown.	d1hivb_.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro Fold 1 0 0 1 10 25 0 0 1 0 0 0 0 1 0 0 0 0 0 0 Superfamily 1 0 0 1 10 25 0 0 1 0 0 0 0 1 0 0 0 0 0 0
Function Classification	Domain d1hiva_.	Domains not shown.	d1hivb_.
Augmented Flybase+ENZYME GenProtEC MIPS d1hiva_ E-3.1.26.4/2.7.7.49/3.4.23.16 NO NO
Core Structure does not exist for 1hiv.
Alignments.	Domain d1hiva_.	Domains not shown.	d1hivb_.
# Pairs untrimmed RMS trimmed RMS %sequence identity structure p-value sequence p-value Fold 107 4.59 0.80 32.06 1.13e-06 8.08e-02 Superfamily 107 4.59 0.80 32.06 1.13e-06 8.08e-02 Family 21 5.23 0.71 34.60 2.29e-06 3.07e-02 Fold only 0 . . . . . Sfam only 8 4.94 1.62 10.47 9.13e-06 1
Scop information.
RCSB PDB information.