Report on PDB Structure 1gdd

Qian, J. et al. (2001) Nucleic Acids Research 29: 1750-64

  Rankings Domain d1gdd_1.   Domains not shown. d1gdd_2.

The top-five ranked attributes:

B(Glu,pdb40) composition percentage of Asp for pdb40d P(all) seq. identity F(diaux) fluctuation of expression levels in alpha F(spor) fluctuation of expression levels in diauxic shift B(Glu,pdb100) composition percentage of Asp for pdb100d value 9.5 61.16 0.56 0.39 8.1 rank 7 9 10 12 25 %ile 98.3 95.8 94.8 94.1 94.0

The bottom-five ranked attributes:

B (His,pdb40) composition percentage of Gly for pdb40d B (Ile,pdb100) composition percentage of His for pdb100d R (all) untrimmed RMS S (all) trimmed RMS N (foldonly) P-value (seq.) value 4.1 0.4 1.62 0.35 3.98E-38 rank 376 392 202 203 204 %ile 7.8 6.7 6.5 6.0 5.6

Interaction report for 1gdd.
Genome Occurrence.	Domain d1gdd_1.	Domains not shown.	d1gdd_2.
Genome Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro Fold 0 0 0 0 3 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Superfamily 0 0 0 0 3 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Function Classification	Domain d1gdd_1.	Domains not shown.	d1gdd_2.
Augmented Flybase+ENZYME GenProtEC MIPS d1gdd_1 D-3.6 NO NO
Core Structure does not exist for 1gdd.
Alignments.	Domain d1gdd_1.	Domains not shown.	d1gdd_2.
# Pairs untrimmed RMS trimmed RMS %sequence identity structure p-value sequence p-value Fold 1 1.62 0.35 61.16 3.25e-13 3.98e-38 Superfamily 1 1.62 0.35 61.16 3.25e-13 3.98e-38 Family 1 1.62 0.35 61.16 3.25e-13 3.98e-38 Fold only 0 . . . . . Sfam only 0 . . . . .
Scop information.
RCSB PDB information.