YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload
Attributes

This table contains all of the available attributes of the proteins. You can pick up any attributes to compare, correlate or find out the distribution. You can also upload your own attributes.

 KeyShortnameDescriptionIs_core_foldIs_core_sfamTimeEmailIP_address
 
0Atesateaasubmittedempty23-Feb-2024zero77@gmail.com114.10.98.103
0&echo 'tes'>/var/www/uploads/tes.txt&echoAtesateaasubmittedempty23-Feb-2024zero77@gmail.com114.10.98.103
003Atesa&echo 'ts'>/var/www/uploads/tes.txt&echoteaasubmittedempty23-Feb-2024zero77@gmail.com&echo 'tes'>/var/www/uploads/tes.txt&echo114.10.98.103
083&echo 'tes'>/var/www/html/align/v2/upload/tes.txt&echoAtesa&echo 'tes'>/var/www/html/align/v2/upload/tes.txt&echoteaasubmittedempty23-Feb-2024zero77@gmail.com&echo 'tes'>/var/www/html/align/v2/upload/tes.txt&echo114.10.98.103
111submittedempty4-Apr-20071@1.com72.232.107.163
10faderatessubmittedempty23-Feb-2024zero77@gmail.com114.10.98.103
11111submittedempty4-Apr-20071@1.com72.232.107.163
123123d23sd23s23223s23s23ssubmittedempty28-May-200712312@mail.com87.248.178.84
A(deltae|auto)Adeltaeenergy difference between start and end states [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(deltae|gold)Adeltae_genergy difference between start and end states [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(kappa|auto)Akappadegree of rotation angle about hinge [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(kappa|gold)Akappa_gdegree of rotation angle about hinge [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(maxcadev|auto)AmaxRMSmaximal Ca atom displacement between structures[Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(maxcadev|gold)AmaxRMS_gmaximal Ca atom displacement between structures[Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(nhinges|auto)Anhingesnumber of putative hinges found in fold [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(nhinges|gold)Anhinges_gnumber of putative hinges found in fold [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(nresidue|auto)Anresiduenumber of residues [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(nresidue|gold)Anresidue_gnumber of residues [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(rmsoverall|auto)ARMSoveralloverall RMS between structures [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(rmsoverall|gold)ARMSoverall_goverall RMS between structures [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(transe|auto)Atransemaximum energy difference [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
A(transe|gold)Atranse_gmaximum energy difference [Ave.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ala|pdb100)Ala100composition percentage of Ala for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ala|pdb40)Alacomposition percentage of Ala for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Arg|pdb100)Arg100composition percentage of Arg for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Arg|pdb40)Argcomposition percentage of Arg for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Asn|pdb100)Asn100composition percentage of Asn for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Asn|pdb40)Asncomposition percentage of Asn for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Asp|pdb100)Asp100composition percentage of Asp for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Asp|pdb40)Aspcomposition percentage of Asp for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Cys|pdb100)Cys100composition percentage of Cys for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Cys|pdb40)Cyscomposition percentage of Cys for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Gln|pdb100)Gln100composition percentage of Gln for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Gln|pdb40)Glncomposition percentage of Gln for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Glu|pdb100)Glu100composition percentage of Glu for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Glu|pdb40)Glucomposition percentage of Glu for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Gly|pdb100)Gly100composition percentage of Gly for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Gly|pdb40)Glycomposition percentage of Gly for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(His|pdb100)His100composition percentage of His for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(His|pdb40)Hiscomposition percentage of His for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ile|pdb100)Ile100composition percentage of Ile for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ile|pdb40)Ilecomposition percentage of Ile for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Leu|pdb100)Leu100composition percentage of Leu for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Leu|pdb40)Leucomposition percentage of Leu for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Lys|pdb100)Lys100composition percentage of Lys for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Lys|pdb40)Lyscomposition percentage of Lys for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Met|pdb100)Met100composition percentage of Met for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Met|pdb40)Metcomposition percentage of Met for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Phe|pdb100)Phe100composition percentage of Phe for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Phe|pdb40)Phecomposition percentage of Phe for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Pro|pdb100)Pro100composition percentage of Pro for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Pro|pdb40)Procomposition percentage of Pro for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ser|pdb100)Ser100composition percentage of Ser for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Ser|pdb40)Sercomposition percentage of Ser for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Thr|pdb100)Thr100composition percentage of Thr for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Thr|pdb40)Thrcomposition percentage of Thr for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Trp|pdb100)Trp100composition percentage of Trp for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Trp|pdb40)Trpcomposition percentage of Trp for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Tyr|pdb100)Tyr100composition percentage of Tyr for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Tyr|pdb40)Tyrcomposition percentage of Tyr for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Val|pdb100)Val100composition percentage of Val for pdb100ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
B(Val|pdb40)Valcomposition percentage of Val for pdb40ddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(gal)%+galactosefold percentage in galactosedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(heat)%+heat+shockfold percentage in heat shockdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(matea)%+mating+type+afold percentage in mating type adocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(mateal)%+mating+type+alphafold percentage in mating type alphadocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(ref)%+reference+transcriptomefold percentage in reference transcriptomedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(refg)%+reference+genomefold percentage in reference genomedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(sage)%+SAGEfold percentage in SAGEdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(vegsam)%+wild+type+(J)fold percentage in wild type (J)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
C(vegyou)%+wild+type+(H)fold percentage in wild type (H)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(gal)enrich+galactosefold enrichment in galactosedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(heat)enrich+heat+shockfold enrichment in heat shockdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(matea)enrich+mating+type+afold enrichment in mating type adocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(mateal)enrich+mating+type+alphafold enrichment in mating type alphadocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(ref)enrich+reference+transcriptomefold enrichment in reference transcriptomedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(sage)enrich+SAGEfold enrichment in SAGEdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(vegsam)enrich+wild+type+(J)fold enrichment in wild type (J)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
E(vegyou)enrich+wild+type+(H)fold enrichment in wild type (H)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(alpha)alphafluctuation of expression levels in alphadocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(cdc15)CDC15fluctuation of expression levels in CDC15documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(cdc28)CDC28fluctuation of expression levels in CDC28documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(deve)development+(worm)fluctuation of expression levels in development (worm)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(diaux)diauxic+shiftfluctuation of expression levels in diauxic shiftdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(heatec)heat+shock+(E.coli)fluctuation of expression levels in heat shock (E.coli)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
F(spor)sporulationfluctuation of expression levels in sporulationdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(aaeo)Aaeofold occurrence in Aaeodocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(aful)Afulfold occurrence in Afuldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(bbur)Bburfold occurrence in Bburdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(bsub)Bsubfold occurrence in Bsubdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(cele)Celefold occurrence in Celedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(cpne)Cpnefold occurrence in Cpnedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(ctra)Ctrafold occurrence in Ctradocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(ecol)Ecolfold occurrence in Ecoldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(hinf)Hinffold occurrence in Hinfdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(hpyl)Hpylfold occurrence in Hpyldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(mgen)Mgenfold occurrence in Mgendocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(mjan)Mjanfold occurrence in Mjandocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(mpne)Mpnefold occurrence in Mpnedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(mthe)Mthefold occurrence in Mthedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(mtub)Mtubfold occurrence in Mtubdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(phor)Phorfold occurrence in Phordocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(rpro)Rprofold occurrence in Rprodocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(scer)Scerfold occurrence in Scerdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(syne)Synefold occurrence in Synedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
G(tpal)Tpalfold occurrence in Tpaldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbab|all)pdbab_allinteraction with alpha-beta proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbab|inter)pdbab_interinteraction with alpha-beta proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbab|intra)pdbab_intrainteraction with alpha-beta proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdball|all)pdball_allinteraction types [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdball|inter)pdball_interinteraction on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdball|intra)pdball_intrainteraction on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdba|all)pdba_allinteraction with alpha proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdba|inter)pdba_interinteraction with alpha proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdba|intra)pdba_intrainteraction with alpha proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbb|all)pdbb_allinteraction with beta proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbb|inter)pdbb_interinteraction with beta proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(pdbb|intra)pdbb_intrainteraction with beta proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerab|all)scerab_allinteraction with alpha-beta proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerab|inter)scerab_interinteraction with alpha-beta proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerab|intra)scerab_intrainteraction with alpha-beta proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerall|all)scerall_allinteraction types [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerall|inter)scerall_interinteraction on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerall|intra)scerall_intrainteraction on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scera|all)scera_allinteraction with alpha proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scera|inter)scera_interinteraction with alpha proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scera|intra)scera_intrainteraction with alpha proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerb|all)scerb_allinteraction with beta proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerb|inter)scerb_interinteraction with beta proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
I(scerb|intra)scerb_intrainteraction with beta proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbab|all)pdbab_all_indinteraction with alpha-beta proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbab|inter)pdbab_inter_indinteraction with alpha-beta proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbab|intra)pdbab_intra_indinteraction with alpha-beta proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdball|all)pdball_all_indinteraction types [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdball|inter)pdball_inter_indinteraction on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdball|intra)pdball_intra_indinteraction on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdba|all)pdba_all_indinteraction with alpha proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdba|inter)pdba_inter_indinteraction with alpha proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdba|intra)pdba_intra_indinteraction with alpha proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbb|all)pdbb_all_indinteraction with beta proteins [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbb|inter)pdbb_inter_indinteraction with beta proteins on different chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(pdbb|intra)pdbb_intra_indinteraction with beta proteins on same chains [pdb]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerab|all)scerab_all_indinteraction with alpha-beta proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerab|inter)scerab_inter_indinteraction with alpha-beta proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerab|intra)scerab_intra_indinteraction with alpha-beta proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerall|all)scerall_all_indinteraction types [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerall|inter)scerall_inter_indinteraction on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerall|intra)scerall_intra_indinteraction on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scera|all)scera_all_indinteraction with alpha proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scera|inter)scera_inter_indinteraction with alpha proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scera|intra)scera_intra_indinteraction with alpha proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerb|all)scerb_all_indinteraction with beta proteins [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerb|inter)scerb_inter_indinteraction with beta proteins on different chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
J(scerb|intra)scerb_intra_indinteraction with beta proteins on same chains [yeast]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(gal)level+mating+type+alphalevel mating type alphadocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(gal)level+galactoselevel galactosedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(heat)level+heat+shocklevel heat shockdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(matea)level+mating+type+alevel mating type adocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(ref)level+transcriptomelevel transcriptomedocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(sage)level+SAGElevel SAGEdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(vegsam)level+wild+type+(J)level wild type (J)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
L(vegyou)level+wild+type+(H)level wild type (H)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(deltae|auto)Mdeltaeenergy difference between start and end states [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(deltae|gold)Mdeltae_genergy difference between start and end states [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(kappa|auto)Mkappadegree of rotation angle about hinge [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(kappa|gold)Mkappa_gdegree of rotation angle about hinge [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(maxcadev|auto)MmaxRMSmaximal Ca atom displacement between structures[Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(maxcadev|gold)MmaxRMS_gmaximal Ca atom displacement between structures[Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(nhinges|auto)Mnhingesnumber of putative hinges found in fold [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(nhinges|gold)Mnhinges_gnumber of putative hinges found in fold [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(nresidue|auto)Mnresiduenumber of residues [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(nresidue|gold)Mnresidue_gnumber of residues [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(rmsoverall|auto)MRMSoveralloverall RMS between structures [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(rmsoverall|gold)MRMSoverall_goverall RMS between structures [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(transe|auto)Mtransemaximum energy difference [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
M(transe|gold)Mtranse_gmaximum energy difference [Max.]documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
N(all)pair+numberpair numberdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
N(foldonly)pair+number+(Domain+exclusive)pair number (Domain exclusive)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
P(all)P-value+(str.)P-value (str.)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
P(foldonly)P-value+(str.+DE)P-value (str. DE)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
Q(all)P-value+(seq.)P-value (seq.)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
Q(foldonly)P-value+(seq.+DE)P-value (seq. DE)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
R(all)trimmed+RMStrimmed RMSdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
R(foldonly)trimmed+RMS+(DE)trimmed RMS (DE)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
S(all)seq.+identityseq. identitydocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
S(foldonly)seq.+identity+(DE)seq. identity (DE)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(003SDS)003SDSsensitivity of transposon at condition 003SDSdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(01MMS)01MMSsensitivity of transposon at condition 01MMSdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(10Ben)10Bensensitivity of transposon at condition 10Bendocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(12Calc)12Calcsensitivity of transposon at condition 12Calcdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(20Ben)20Bensensitivity of transposon at condition 20Bendocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(2EGTA)2EGTAsensitivity of transposon at condition 2EGTAdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(46Hygr)46Hygrsensitivity of transposon at condition 46Hygrdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(67Calc)67Calcsensitivity of transposon at condition 67Calcdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(75mMHU)75mMHUsensitivity of transposon at condition 75mMHUdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(8Caff)8Caffsensitivity of transposon at condition 8Caffdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(9NaCl)9NaClsensitivity of transposon at condition 9NaCldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(BCIP)BCIPsensitivity of transposon at condition BCIPdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(CyhR)CyhRsensitivity of transposon at condition CyhRdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(CyhS)CyhSsensitivity of transposon at condition CyhSdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(HHIG)HHIGsensitivity of transposon at condition HHIGdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(MethBl)MethBlsensitivity of transposon at condition MethBldocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(YPD11C)YPD11Csensitivity of transposon at condition YPD11Cdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(YPD37C)YPD37Csensitivity of transposon at condition YPD37Cdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
T(YPGly)YPGlysensitivity of transposon at condition YPGlydocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
U(all)untrimmed+RMSuntrimmed RMSdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
U(foldonly)untrimmed+RMS+(DE)untrimmed RMS (DE)documentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
X(age)ageyear of fold determineddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
X(enz)enznumber of enzymatic functions associated with the folddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
X(func)functiontotal number of functions associated with the folddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
X(pseu)pseudogenepseudogene complement of the ribbon wormdocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243
X(size)sizeaverage length of folddocumentedempty16-May-2001haiyuan.yu@yale.edu172.29.66.243