Index of /hyper/mbg/ProtEvol/unpack
Name Last modified Size Description
![[DIR]](/icons/back.gif)
Parent Directory 17-May-1996 15:46 -
![[TXT]](/icons/text.gif)
README 03-Oct-1994 12:39 2k
![[DIR]](/icons/folder.gif)
ProtEvol_TreeWgt/ 17-May-1996 15:46 -
ProtEvol_Paper/ 17-May-1996 15:46 -
ProtEvol_Align/ 06-Sep-1996 16:39 -
ftp Address: ftp://hyper.stanford.edu/pub/mbg/ProtEvol/
ftp://cele.mrc-lmb.cam.ac.uk/pub/ProtEvol/
WWW URL : http://hyper.stanford.edu/~mbg/ftp/ProtEvol/
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M Gerstein, E Sonnhammer, C Chothia (1994).
"Volume Changes in Protein Evolution,"
J. Mol. Biol. 236: 1067-1078
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The following compressed tar archive, which is stored in a variety of
publically accessible places, provides supplementary material relevant
to the above paper. If you use the program or alignments provided,
please properly cite the paper.
Name of the archive: ProtEvol.tar.Z
The archive is in unpacked form in the directory unpack.
Contents of the archive:
ProtEvol_Align/ Structure-based alignments of:
ProtEvol_DHFR.seq 24 Dihydrofolate Reductase sequences
ProtEvol_HB.seq 577 Globin sequences
ProtEvol_PLAZ.seq 40 Plastocyanin-azurin sequences
ProtEvol_Paper/ Text and figures of the paper:
ProtEvol_Fig1a.ps PostScript of figure 1a
ProtEvol_Fig1b.ps "" "" "" 1b
ProtEvol_Fig2.ps "" "" "" 2
ProtEvol_Fig3.ps "" "" "" 3
ProtEvol_Text.ps PostScript of the text and tables
ProtEvol_Text.rtf Macintosh Word 5 rtf file of text and tables
ProtEvol_Text.txt ASCII text files of text and tables
ProtEvol_StandardVolumes.txt
Standard Residue Volumes and Frequencies
ProtEvol_TreeWgt/ Program for weighting aligned sequence to
correct for over-representation.
README README describing the program
db Sample data
dnd Sample data
treewgt.SGI Iris binary
treewgt.SUN Sun binary
treewgt.c Program source code