Index of /hyper/mbg/ProtEvol

      Name                    Last modified       Size  Description


[DIR] Parent Directory        22-Jun-1997 17:01      -  
[CMP] ProtEvol.tar.Z          30-Sep-1994 12:04   1.1M  tar archive
[TXT] README                  03-Oct-1994 13:42     2k  
[TXT] ToTopLevel.html         22-Aug-1994 02:39     1k  
[DIR] unpack/                 17-May-1996 16:46      -  

ftp Address: ftp://hyper.stanford.edu/pub/mbg/ProtEvol/
             ftp://cele.mrc-lmb.cam.ac.uk/pub/ProtEvol/
WWW URL   : http://hyper.stanford.edu/~mbg/ftp/ProtEvol/

This archive contains files relating to the following paper:

-------------------------------------------
M Gerstein, E Sonnhammer, C Chothia (1994). 
  "Volume Changes in Protein Evolution," 
       J. Mol. Biol. 236: 1067-1078                                     
-------------------------------------------
                                                                         
If you use the program or alignments provided,
please properly cite the paper.

Name of the archive: ProtEvol.tar.Z
The archive is in unpacked form in the directory unpack. 

Contents of the archive:

ProtEvol_Align/     Structure-based alignments of:

ProtEvol_DHFR.seq      24 Dihydrofolate Reductase sequences
ProtEvol_HB.seq       577 Globin sequences
ProtEvol_PLAZ.seq      40 Plastocyanin-azurin sequences

ProtEvol_Paper/     Text and figures of the paper:

ProtEvol_Fig1a.ps      PostScript of figure 1a
ProtEvol_Fig1b.ps         ""      ""   ""   1b
ProtEvol_Fig2.ps          ""      ""   ""   2
ProtEvol_Fig3.ps          ""      ""   ""   3
ProtEvol_Text.ps       PostScript of the text and tables
ProtEvol_Text.rtf      Macintosh Word 5 rtf file of text and tables
ProtEvol_Text.txt      ASCII text files of text and tables 
ProtEvol_StandardVolumes.txt 
                       Standard Residue Volumes and Frequencies 

ProtEvol_TreeWgt/   Program for weighting aligned sequence to 
                    correct for over-representation. 

README                 README describing the program
db                     Sample data
dnd                    Sample data 
treewgt.SGI            Iris binary
treewgt.SUN            Sun  binary
treewgt.c              Program source code