Organism

Category

Genome

Abbreviation

ORFs

Physiological condition

Pyrococcus horikoshii

(Strain OT3)

(Kawarabayasi et al., 1998)

archaea

OT

2061

98° C, anaerobe

Aquifex aeolicus

(Deckert et al., 1998)

eubacteria,

gram negative

AA

1522

95° C

Methanococcus janaschii

(Bult et al., 1996)

archaea

MJ

1735

85° C, anaerobe

Archaeoglobus fulgidus

(Klenk et al., 1997)

archaea

AF

2409

83° C, anaerobe

Methanobacterium

thermoautotrophicum (Smith et al., 1997)

archaea

MT

1869

65° C, anaerobe

Haemophilus influenzae (Fleischmann et al., 1995)

eubacteria,

gram negative

HI

1680

mesophilic temp.

Mycoplasma genitalium (Fraser et al., 1995)

eubacteria,

gram positive

MG

470

mesophilic temp.

Mycoplasma pneumoniae

(Himmelreich et al., 1996)

eubacteria,

gram positive

MP

677

mesophilic temp.

Helicobactor pylori

(Tomb et al., 1997)

eubacteria,

gram negative

HI

1590

mesophilic temp.

Escherichia coli

(Blattner et al., 1997)

eubacteria,

gram negative

EC

4288

mesophilic temp.

Synechocystis sp.

(Kaneko et al., 1996)

cyanobacteria

SS

3168

mesophilic temp.

Saccharomyces cerevisiae (Goffeau et al., 1997)

eukaryote,

fungus

SC

6218

mesophilic temp.

Table 1. List of Organisms.

The table lists the twelve organisms whose sequences are used in calculation. Column three shows the two-letter abbreviations for the genomes of the organisms listed in the first column. The fourth column lists the number of proteins in the genome. The last column shows the physiological temperatures of thermophiles. For mesophiles we referred to 'mesophilic temperatures' which range from 10 to 45 ° C.