Organism |
Category |
Genome Abbreviation |
ORFs |
Physiological condition |
Pyrococcus horikoshii (Strain OT3) (Kawarabayasi et al., 1998) |
archaea |
OT |
2061 |
98° C, anaerobe |
Aquifex aeolicus (Deckert et al., 1998) |
eubacteria, gram negative |
AA |
1522 |
95° C |
Methanococcus janaschii (Bult et al., 1996) |
archaea |
MJ |
1735 |
85° C, anaerobe |
Archaeoglobus fulgidus (Klenk et al., 1997) |
archaea |
AF |
2409 |
83° C, anaerobe |
Methanobacterium thermoautotrophicum (Smith et al., 1997) |
archaea |
MT |
1869 |
65° C, anaerobe |
Haemophilus influenzae (Fleischmann et al., 1995) |
eubacteria, gram negative |
HI |
1680 |
mesophilic temp. |
Mycoplasma genitalium (Fraser et al., 1995) |
eubacteria, gram positive |
MG |
470 |
mesophilic temp. |
Mycoplasma pneumoniae (Himmelreich et al., 1996) |
eubacteria, gram positive |
MP |
677 |
mesophilic temp. |
Helicobactor pylori (Tomb et al., 1997) |
eubacteria, gram negative |
HI |
1590 |
mesophilic temp. |
Escherichia coli (Blattner et al., 1997) |
eubacteria, gram negative |
EC |
4288 |
mesophilic temp. |
Synechocystis sp. (Kaneko et al., 1996) |
cyanobacteria |
SS |
3168 |
mesophilic temp. |
Saccharomyces cerevisiae (Goffeau et al., 1997) |
eukaryote, fungus |
SC |
6218 |
mesophilic temp. |
Table 1
. List of Organisms.The table lists the twelve organisms whose sequences are used in calculation. Column three shows the two-letter abbreviations for the genomes of the organisms listed in the first column. The fourth column lists the number of proteins in the genome. The last column shows the physiological temperatures of thermophiles. For mesophiles we referred to 'mesophilic temperatures' which range from 10 to 45 ° C.