YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Structural Annotation for ORF YFL026W in the S. cerevisiae [Scer] genome



TM best:
From 48 To 74: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
TVTQAIMFGV RCGAAALTLI VMWMTSR      
From 78 To 100: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
TPIFIINQVS LFLIILHSAL YFK      
From 161 To 195: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
RIGLMLTSIS FTLGIATVTM YFVSAVKGMI VTYND     
From 203 To 231: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
YFNASTILLA SSINFMSFVL VVKLILAIR      
From 241 To 270: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
FDSFHILLIM SCQSLLVPSI IFILAYSLEP      
From 272 To 304: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
QGTDVLTTVA TLLAVLSLPL SSMWATAANN ASK     
Low complexity:
From 240 To 342 as query of Blast search against Swissprot
QFDSFHILLI MSCQSLLVPS IIFILAYSLE PNQGTDVLTT VATLLAVLSL PLSSMWATAA NNASKTNTIT SDFTTSTDRF 
YPGTLSSFQT DSINNDAKSS LRS
Transmembrane:
From 48 To 74: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
TVTQAIMFGV RCGAAALTLI VMWMTSR      
From 78 To 100: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
TPIFIINQVS LFLIILHSAL YFK      
From 161 To 195: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
RIGLMLTSIS FTLGIATVTM YFVSAVKGMI VTYND     
From 203 To 231: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
YFNASTILLA SSINFMSFVL VVKLILAIR      
From 241 To 270: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
FDSFHILLIM SCQSLLVPSI IFILAYSLEP      
From 272 To 304: Pairs found in the segment: frequency in genome Scer or in Swiss-Prot
QGTDVLTTVA TLLAVLSLPL SSMWATAANN ASK     
Linker:
From 1 To 47 as query of Blast search against Swissprot
MSDAAPSLSN LFYDPTYNPG QSTINYTSIY GNGSTITFDE LQGLVNS    
From 75 To 77
SRK        
From 196 To 202
VSATQDK        
From 232 To 239
SRRFLGLK        
Uncharacterized:
From 101 To 160 as query of Blast search against Swissprot
YLLSNYSSVT YALTGFPQFI SRGDVHVYGA TNIIQVLLVA SIETSLVFQI KVIFTGDNFK   
From 343 To 431 as query of Blast search against Swissprot
RLYDLYPRRK ETTSDKHSER TFVSETADDI EKNQFYQLPT PTSSKNTRIG PFADASYKEG EVEPVDMYTP DTAADEEARK 
FWTEDNNNL

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