In this genome, there are 468 proteins in total. 68 are almost definitely membrane proteins, 64 are marginal membrane proteins, and 31 tricky ones in the middle.
Here are the 31 middling ones. These are proteins with more 2 or more TM-helices with a bad minhall value (worse than 1.75) or proteins with only a single TM helix but with a good minhall value (better than 1.75).
id_ | sig | minhall | ntmproc | totaa | avg_en | minhseg | score |
MG130 | 0 | -2.34 | 1 | 39 | -0.91795 | -0.91795 | 4 |
MG055 | 0 | -2.73 | 1 | 37 | -1.11622 | -1.11622 | 4 |
MG109 | 0 | -2.73 | 1 | 37 | -1.14595 | -1.14595 | 4 |
MG331 | 0 | -2.84 | 1 | 34 | -1.81176 | -1.81176 | 4 |
MG105 | 0 | -2.935 | 1 | 32 | -1.09375 | -1.09375 | 4 |
MG413 | 0 | -2.465 | 1 | 31 | -0.27419 | -0.27419 | 4 |
MG212 | 1 | -2.15 | 1 | 31 | -0.5 | -0.5 | 4 |
MG364 | 0 | -2.585 | 1 | 30 | -0.46333 | -0.46333 | 4 |
MG415 | 0 | -2.53 | 1 | 30 | -0.44333 | -0.44333 | 4 |
MG397 | 0 | -2.5 | 1 | 30 | -1.35 | -1.35 | 4 |
MG281 | 1 | -2.085 | 1 | 29 | -1.0069 | -1.0069 | 4 |
MG414 | 1 | -2.465 | 1 | 27 | -1.35185 | -1.35185 | 4 |
MG441 | 1 | -2.28 | 1 | 27 | -0.63704 | -0.63704 | 4 |
MG286 | 1 | -2.05 | 1 | 23 | -0.98261 | -0.98261 | 4 |
MG390 | 0 | -1.955 | 7 | 168 | -0.83988 | -1.81071 | 3 |
MG114 | 0 | -1.945 | 6 | 150 | -0.86867 | -1.20476 | 3 |
MG321 | 1 | -1.19 | 3 | 66 | -0.95455 | -1.05714 | 3 |
MG436 | 0 | -1.875 | 2 | 63 | -0.97302 | -1.15588 | 3 |
MG404 | 0 | -1.965 | 2 | 60 | -1.23667 | -1.73103 | 3 |
MG049 | 0 | -1.795 | 1 | 35 | -0.78286 | -0.78286 | 2 |
MG220 | 1 | -1.825 | 1 | 33 | -0.64242 | -0.64242 | 2 |
MG111 | 0 | -1.975 | 1 | 32 | -0.7125 | -0.7125 | 2 |
MG271 | 0 | -1.805 | 0 | 0 | - | - | 2 |
MG031 | 0 | -1.405 | 2 | 50 | -0.73 | -0.91905 | 1 |
MG046 | 0 | -1.27 | 2 | 49 | -0.63061 | -0.79048 | 1 |
MG106 | 0 | -1.74 | 2 | 46 | -0.92609 | -1.41739 | 1 |
MG372 | 0 | -1.47 | 2 | 45 | -0.6 | -0.77917 | 1 |
MG266 | 0 | -1.265 | 2 | 45 | -0.87778 | -0.96957 | 1 |
MG336 | 0 | -1.135 | 2 | 44 | -0.74545 | -0.82174 | 1 |
MG137 | 0 | -1.36 | 2 | 42 | -0.75476 | -0.95714 | 1 |
MG075 | 1 | -1.285 | 2 | 42 | -0.79286 | -0.99524 | 1 |
These are all "sure" membrane proteins with more than 2 TM helices and a good min H score.
id_ | sig | minhall | ntmproc | totaa | avg_en | minhseg | score |
MG411 | 1 | -2.72 | 13 | 400 | -0.81375 | -1.22273 | 4 |
MG277 | 1 | -2.54 | 13 | 375 | -0.90373 | -1.16818 | 4 |
MG069 | 0 | -2.395 | 14 | 375 | -0.9936 | -1.94762 | 4 |
MG294 | 1 | -2.725 | 13 | 357 | -0.84818 | -1.31429 | 4 |
MG322 | 1 | -2.4 | 12 | 354 | -0.85141 | -1.1 | 4 |
MG062 | 0 | -2.305 | 13 | 352 | -0.82102 | -1.2375 | 4 |
MG225 | 1 | -2.63 | 12 | 348 | -0.71695 | -1.46296 | 4 |
MG447 | 0 | -2.13 | 13 | 348 | -0.92443 | -1.28182 | 4 |
MG226 | 0 | -2.45 | 11 | 347 | -0.78559 | -1.44571 | 4 |
MG291 | 1 | -2.36 | 14 | 335 | -0.77313 | -1.34167 | 4 |
MG061 | 0 | -2.32 | 14 | 331 | -0.99909 | -1.45667 | 4 |
MG071 | 0 | -2.375 | 13 | 323 | -0.80186 | -1.34783 | 4 |
MG170 | 1 | -2.54 | 12 | 321 | -0.87944 | -1.34091 | 4 |
MG064 | 0 | -2.54 | 12 | 316 | -0.94715 | -1.35238 | 4 |
MG098 | 0 | -2.47 | 10 | 295 | -0.9739 | -1.31739 | 4 |
MG120 | 0 | -2.52 | 9 | 281 | -0.85979 | -1.2931 | 4 |
MG121 | 0 | -2.39 | 10 | 277 | -0.83249 | -1.76364 | 4 |
MG147 | 0 | -2.51 | 9 | 251 | -0.9239 | -1.425 | 4 |
MG316 | 1 | -2.26 | 9 | 248 | -0.71935 | -1.692 | 4 |
MG306 | 1 | -2.79 | 7 | 232 | -0.91595 | -1.17333 | 4 |
MG437 | 0 | -2.245 | 9 | 231 | -0.82554 | -1.29643 | 4 |
MG320 | 0 | -2.625 | 8 | 228 | -0.79167 | -1.06667 | 4 |
MG443 | 0 | -2.325 | 8 | 223 | -0.80314 | -0.94762 | 4 |
MG078 | 0 | -2.655 | 8 | 222 | -0.94324 | -1.61364 | 4 |
MG464 | 1 | -2.135 | 7 | 216 | -0.86157 | -1.44348 | 4 |
MG188 | 0 | -2.47 | 6 | 215 | -0.72837 | -1.16842 | 4 |
MG135 | 0 | -2.34 | 8 | 213 | -0.83052 | -1.26364 | 4 |
MG432 | 0 | -2.275 | 6 | 210 | -0.98095 | -1.13077 | 4 |
MG086 | 1 | -2.12 | 8 | 207 | -0.67246 | -1.75455 | 4 |
MG077 | 1 | -2.335 | 6 | 202 | -0.77228 | -1.2 | 4 |
MG015 | 0 | -2.325 | 8 | 202 | -0.9896 | -1.41429 | 4 |
MG043 | 1 | -2.57 | 7 | 199 | -0.97236 | -1.332 | 4 |
MG014 | 1 | -2.44 | 7 | 192 | -0.83958 | -1.0725 | 4 |
MG189 | 0 | -2.485 | 6 | 189 | -0.68624 | -0.95294 | 4 |
MG247 | 0 | -2.54 | 7 | 187 | -0.95134 | -1.65 | 4 |
MG044 | 1 | -2.39 | 6 | 187 | -0.86631 | -1.30333 | 4 |
MG405 | 0 | -2.31 | 6 | 183 | -0.86448 | -1.325 | 4 |
MG181 | 0 | -2.435 | 6 | 170 | -0.94059 | -1.25 | 4 |
MG452 | 0 | -2.3 | 5 | 163 | -0.85767 | -1.03125 | 4 |
MG302 | 1 | -2.17 | 5 | 161 | -0.97267 | -1.30769 | 4 |
MG313 | 1 | -2.345 | 4 | 146 | -0.82329 | -0.8625 | 4 |
MG314 | 0 | -2.49 | 5 | 145 | -0.9 | -1.51739 | 4 |
MG146 | 0 | -2.37 | 4 | 131 | -0.86489 | -1.2325 | 4 |
MG033 | 1 | -2.11 | 4 | 122 | -0.93279 | -1.116 | 4 |
MG133 | 0 | -2.54 | 4 | 119 | -0.76218 | -0.90417 | 4 |
MG144 | 0 | -2.615 | 4 | 113 | -0.83097 | -1.13636 | 4 |
MG210 | 0 | -2.16 | 4 | 109 | -0.71743 | -1.52083 | 4 |
MG028 | 1 | -2.31 | 3 | 105 | -0.85238 | -0.9973 | 4 |
MG191 | 1 | -2.235 | 4 | 103 | -0.95534 | -1.22 | 4 |
MG255 | 0 | -2.38 | 3 | 94 | -0.56383 | -0.83077 | 4 |
MG406 | 0 | -2.005 | 4 | 92 | -1.20435 | -1.85 | 4 |
MG256 | 0 | -2.765 | 4 | 90 | -1.06111 | -1.35455 | 4 |
MG241 | 0 | -2.635 | 3 | 86 | -0.61163 | -0.66875 | 4 |
MG267 | 1 | -2.285 | 3 | 85 | -1.01176 | -1.21071 | 4 |
MG131 | 0 | -2.435 | 3 | 70 | -1.25143 | -1.76818 | 4 |
MG242 | 0 | -2.54 | 3 | 66 | -1.12424 | -1.53636 | 4 |
MG318 | 1 | -2.415 | 2 | 66 | -1.09091 | -1.37419 | 4 |
MG457 | 0 | -2.34 | 2 | 66 | -0.77121 | -0.84375 | 4 |
MG319 | 1 | -2.215 | 2 | 63 | -0.93651 | -1.35357 | 4 |
MG279 | 1 | -2.32 | 2 | 62 | -0.77419 | -0.95417 | 4 |
MG456 | 1 | -2.51 | 3 | 61 | -0.73607 | -1.3381 | 4 |
MG403 | 1 | -2.58 | 2 | 60 | -0.805 | -0.83333 | 4 |
MG280 | 0 | -2.27 | 2 | 59 | -0.89492 | -1.272 | 4 |
MG076 | 1 | -2.145 | 2 | 59 | -0.61864 | -0.77333 | 4 |
MG040 | 1 | -2.02 | 2 | 54 | -0.71481 | -0.80769 | 4 |
MG243 | 0 | -2.025 | 2 | 51 | -0.79608 | -0.85 | 4 |
MG192 | 1 | -2.205 | 2 | 48 | -1.06458 | -1.25417 | 4 |
MG123 | 0 | -2.68 | 2 | 42 | -1.13571 | -1.19048 | 4 |