Close-up on the Membrane Proteins in MG

In this genome, there are 468 proteins in total. 68 are almost definitely membrane proteins, 64 are marginal membrane proteins, and 31 tricky ones in the middle.

31 Tricky Membrane Proteins

Here are the 31 middling ones. These are proteins with more 2 or more TM-helices with a bad minhall value (worse than 1.75) or proteins with only a single TM helix but with a good minhall value (better than 1.75).

id_ sig minhall ntmproc totaa avg_en minhseg score
MG130 0 -2.34 1 39 -0.91795 -0.91795 4
MG055 0 -2.73 1 37 -1.11622 -1.11622 4
MG109 0 -2.73 1 37 -1.14595 -1.14595 4
MG331 0 -2.84 1 34 -1.81176 -1.81176 4
MG105 0 -2.935 1 32 -1.09375 -1.09375 4
MG413 0 -2.465 1 31 -0.27419 -0.27419 4
MG212 1 -2.15 1 31 -0.5 -0.5 4
MG364 0 -2.585 1 30 -0.46333 -0.46333 4
MG415 0 -2.53 1 30 -0.44333 -0.44333 4
MG397 0 -2.5 1 30 -1.35 -1.35 4
MG281 1 -2.085 1 29 -1.0069 -1.0069 4
MG414 1 -2.465 1 27 -1.35185 -1.35185 4
MG441 1 -2.28 1 27 -0.63704 -0.63704 4
MG286 1 -2.05 1 23 -0.98261 -0.98261 4
MG390 0 -1.955 7 168 -0.83988 -1.81071 3
MG114 0 -1.945 6 150 -0.86867 -1.20476 3
MG321 1 -1.19 3 66 -0.95455 -1.05714 3
MG436 0 -1.875 2 63 -0.97302 -1.15588 3
MG404 0 -1.965 2 60 -1.23667 -1.73103 3
MG049 0 -1.795 1 35 -0.78286 -0.78286 2
MG220 1 -1.825 1 33 -0.64242 -0.64242 2
MG111 0 -1.975 1 32 -0.7125 -0.7125 2
MG271 0 -1.805 0 0 - - 2
MG031 0 -1.405 2 50 -0.73 -0.91905 1
MG046 0 -1.27 2 49 -0.63061 -0.79048 1
MG106 0 -1.74 2 46 -0.92609 -1.41739 1
MG372 0 -1.47 2 45 -0.6 -0.77917 1
MG266 0 -1.265 2 45 -0.87778 -0.96957 1
MG336 0 -1.135 2 44 -0.74545 -0.82174 1
MG137 0 -1.36 2 42 -0.75476 -0.95714 1
MG075 1 -1.285 2 42 -0.79286 -0.99524 1

68 Sure Membrane Proteins

These are all "sure" membrane proteins with more than 2 TM helices and a good min H score.

id_ sig minhall ntmproc totaa avg_en minhseg score
MG411 1 -2.72 13 400 -0.81375 -1.22273 4
MG277 1 -2.54 13 375 -0.90373 -1.16818 4
MG069 0 -2.395 14 375 -0.9936 -1.94762 4
MG294 1 -2.725 13 357 -0.84818 -1.31429 4
MG322 1 -2.4 12 354 -0.85141 -1.1 4
MG062 0 -2.305 13 352 -0.82102 -1.2375 4
MG225 1 -2.63 12 348 -0.71695 -1.46296 4
MG447 0 -2.13 13 348 -0.92443 -1.28182 4
MG226 0 -2.45 11 347 -0.78559 -1.44571 4
MG291 1 -2.36 14 335 -0.77313 -1.34167 4
MG061 0 -2.32 14 331 -0.99909 -1.45667 4
MG071 0 -2.375 13 323 -0.80186 -1.34783 4
MG170 1 -2.54 12 321 -0.87944 -1.34091 4
MG064 0 -2.54 12 316 -0.94715 -1.35238 4
MG098 0 -2.47 10 295 -0.9739 -1.31739 4
MG120 0 -2.52 9 281 -0.85979 -1.2931 4
MG121 0 -2.39 10 277 -0.83249 -1.76364 4
MG147 0 -2.51 9 251 -0.9239 -1.425 4
MG316 1 -2.26 9 248 -0.71935 -1.692 4
MG306 1 -2.79 7 232 -0.91595 -1.17333 4
MG437 0 -2.245 9 231 -0.82554 -1.29643 4
MG320 0 -2.625 8 228 -0.79167 -1.06667 4
MG443 0 -2.325 8 223 -0.80314 -0.94762 4
MG078 0 -2.655 8 222 -0.94324 -1.61364 4
MG464 1 -2.135 7 216 -0.86157 -1.44348 4
MG188 0 -2.47 6 215 -0.72837 -1.16842 4
MG135 0 -2.34 8 213 -0.83052 -1.26364 4
MG432 0 -2.275 6 210 -0.98095 -1.13077 4
MG086 1 -2.12 8 207 -0.67246 -1.75455 4
MG077 1 -2.335 6 202 -0.77228 -1.2 4
MG015 0 -2.325 8 202 -0.9896 -1.41429 4
MG043 1 -2.57 7 199 -0.97236 -1.332 4
MG014 1 -2.44 7 192 -0.83958 -1.0725 4
MG189 0 -2.485 6 189 -0.68624 -0.95294 4
MG247 0 -2.54 7 187 -0.95134 -1.65 4
MG044 1 -2.39 6 187 -0.86631 -1.30333 4
MG405 0 -2.31 6 183 -0.86448 -1.325 4
MG181 0 -2.435 6 170 -0.94059 -1.25 4
MG452 0 -2.3 5 163 -0.85767 -1.03125 4
MG302 1 -2.17 5 161 -0.97267 -1.30769 4
MG313 1 -2.345 4 146 -0.82329 -0.8625 4
MG314 0 -2.49 5 145 -0.9 -1.51739 4
MG146 0 -2.37 4 131 -0.86489 -1.2325 4
MG033 1 -2.11 4 122 -0.93279 -1.116 4
MG133 0 -2.54 4 119 -0.76218 -0.90417 4
MG144 0 -2.615 4 113 -0.83097 -1.13636 4
MG210 0 -2.16 4 109 -0.71743 -1.52083 4
MG028 1 -2.31 3 105 -0.85238 -0.9973 4
MG191 1 -2.235 4 103 -0.95534 -1.22 4
MG255 0 -2.38 3 94 -0.56383 -0.83077 4
MG406 0 -2.005 4 92 -1.20435 -1.85 4
MG256 0 -2.765 4 90 -1.06111 -1.35455 4
MG241 0 -2.635 3 86 -0.61163 -0.66875 4
MG267 1 -2.285 3 85 -1.01176 -1.21071 4
MG131 0 -2.435 3 70 -1.25143 -1.76818 4
MG242 0 -2.54 3 66 -1.12424 -1.53636 4
MG318 1 -2.415 2 66 -1.09091 -1.37419 4
MG457 0 -2.34 2 66 -0.77121 -0.84375 4
MG319 1 -2.215 2 63 -0.93651 -1.35357 4
MG279 1 -2.32 2 62 -0.77419 -0.95417 4
MG456 1 -2.51 3 61 -0.73607 -1.3381 4
MG403 1 -2.58 2 60 -0.805 -0.83333 4
MG280 0 -2.27 2 59 -0.89492 -1.272 4
MG076 1 -2.145 2 59 -0.61864 -0.77333 4
MG040 1 -2.02 2 54 -0.71481 -0.80769 4
MG243 0 -2.025 2 51 -0.79608 -0.85 4
MG192 1 -2.205 2 48 -1.06458 -1.25417 4
MG123 0 -2.68 2 42 -1.13571 -1.19048 4