YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

5.3.1.9
4.1.2.13
5.3.1.1
1.2.1.12
2.7.2.3
5.4.2.1
4.2.1.11
1.1.1.49
1.1.1.44
5.1.3.1
5.3.1.6
2.2.1.1
4.1.3.7
4.2.1.3
1.1.1.42
1.3.9.91
4.2.1.2
1.1.1.37

Pathway View
ENZYME: 5.3.1.1 5.3.1.1

FLUX VALUES
Flux variation (Standard deviation):13.867
FluxBSUBECOLHPYLHINFSCER
Normal814507076
Absolute0.814.6807076.36
Seq IDbsutpiecob3919hpyHP0194hinHI0678sceYDR050C

PERCENTAGE IDENTITY
Average PID: 0.608
% IDBSUBECOLHPYLHINFSCER
BSUB1.0000.3940.3440.420.429
ECOL0.3941.0000.3510.7270.455
HPYL0.3440.421.0000.370.332
HINF0.420.7270.4551.0000.44
SCER0.4290.4550.3320.441.000

EXPRESSION DATA
Multi-scale Reference: 57.54941665 copies per cell

Standard Deviation of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaverage
STDEV0.5470.2090.3140.1620.5621.4230.536
Average of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaveragestdev
STDEV0.0600.1380.090-0.1220.6320.0000.1330.260

EXPRESSION TIMEPOINTS
Mitotic Cell Cycle [normalized transcript level divided by mean value] link
0102030405060708090100110120130140150160
21132027256623202700171924102174179167313647312819483788397936733991
Alpha Factor Arrest Synchronization [log2(ratio of mRNA levels)] link
0714212835424956637077849198105112119
-0.16-0.11-0.1-0.06-0.26-0.03-0.31-0.130.290.270.41-0.260.09-0.220.140.29-0.010.14
CDC15 Synchronization [log2(ratio of mRNA levels)] link
103050708090100110120130140150160
-1.16-1.3-1.09-0.090.050.510.550.440.250.33-0.120.33-0.03
170180190200210220230240250270290
0.240.340.550.190.70.1-0.14-0.470.09-0.17-0.09
CDC28 (Stanford) [log2(ratio of mRNA levels)]
0102030405060708090100110120130140150160
-0.39-0.45-0.11-0.25-0.03-0.69-0.2-0.35-0.631.280.4N/A-0.510.450.520.410.53
Elutration Synchronization [log2(ratio of mRNA levels)] link
0306090120150180210240270300330360390
-0.21-0.220.10.21-0.43-0.18-0.50.140.020.7270.4N/A-0.510.45