YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

5.3.1.9
4.1.2.13
5.3.1.1
1.2.1.12
2.7.2.3
5.4.2.1
4.2.1.11
1.1.1.49
1.1.1.44
5.1.3.1
5.3.1.6
2.2.1.1
4.1.3.7
4.2.1.3
1.1.1.42
1.3.9.91
4.2.1.2
1.1.1.37

Pathway View
ENZYME: 4.1.2.13 4.1.2.13

FLUX VALUES
Flux variation (Standard deviation):17.740
FluxBSUBECOLHPYLHINFSCER
Normal814507093
Absolute0.814.6807093.32
Seq IDbsufbaAecob2925hpyHP0176hinHI0524sceYKL060C

PERCENTAGE IDENTITY
Average PID: 0.568
% IDBSUBECOLHPYLHINFSCER
BSUB1.0000.2850.430.2830.269
ECOL0.2851.0000.2280.7130.489
HPYL0.430.2831.0000.2420.248
HINF0.2830.7130.4891.0000.509
SCER0.2690.4890.2480.5091.000

EXPRESSION DATA
Multi-scale Reference: 249 copies per cell

Standard Deviation of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaverage
STDEV0.4360.1450.3700.0831.0170.5100.427
Average of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaveragestdev
STDEV0.2190.3920.013-0.0080.4730.4430.2550.215

EXPRESSION TIMEPOINTS
Mitotic Cell Cycle [normalized transcript level divided by mean value] link
0102030405060708090100110120130140150160
29142096393930742816245627012606217289613235302824533836268237653952
Alpha Factor Arrest Synchronization [log2(ratio of mRNA levels)] link
0714212835424956637077849198105112119
0-0.08-0.20.16-0.130.25-0.030.150.05-0.040.05-0.18-0.07-0.010.070.12-0.1-0.01
CDC15 Synchronization [log2(ratio of mRNA levels)] link
103050708090100110120130140150160
-0.89-1.17-0.860.080.280.350.150.570.49-0.510.290.420.11
170180190200210220230240250270290
0.320.130.52-0.250.470.1-0.2-0.260.08-0.09-0.14
CDC28 (Stanford) [log2(ratio of mRNA levels)]
0102030405060708090100110120130140150160
-0.1-0.580.33-0.03-0.15-0.35-0.21-0.26-0.531.520.05N/A-0.350.29-0.220.270.34
Elutration Synchronization [log2(ratio of mRNA levels)] link
0306090120150180210240270300330360390
-0.12-0.20.520.650.240.03-0.040.04-0.250.7130.05N/A-0.350.29