YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

5.3.1.9
4.1.2.13
5.3.1.1
1.2.1.12
2.7.2.3
5.4.2.1
4.2.1.11
1.1.1.49
1.1.1.44
5.1.3.1
5.3.1.6
2.2.1.1
4.1.3.7
4.2.1.3
1.1.1.42
1.3.9.91
4.2.1.2
1.1.1.37

Pathway View
ENZYME: 2.7.2.3 2.7.2.3

FLUX VALUES
Flux variation (Standard deviation):14.911
FluxBSUBECOLHPYLHINFSCER
Normal16815070140170.9
Absolute1.6815.770140170.92
Seq IDbsupgkecob2926hpyHP1345hinHI0525sceYCR012W

PERCENTAGE IDENTITY
Average PID: 0.608
% IDBSUBECOLHPYLHINFSCER
BSUB1.0000.4770.4470.4850.484
ECOL0.4771.0000.4160.8130.399
HPYL0.4470.4851.0000.4160.401
HINF0.4850.8130.3991.0000.394
SCER0.4840.3990.4010.3941.000

EXPRESSION DATA
Multi-scale Reference: 223 copies per cell

Standard Deviation of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaverage
STDEV0.3740.2230.3300.7510.3530.5800.435
Average of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaveragestdev
STDEV-0.1100.4490.361-0.8080.3640.7600.1690.554

EXPRESSION TIMEPOINTS
Mitotic Cell Cycle [normalized transcript level divided by mean value] link
0102030405060708090100110120130140150160
10971527241312911293122222491323122451892738188214222819384334242519
Alpha Factor Arrest Synchronization [log2(ratio of mRNA levels)] link
0714212835424956637077849198105112119
0.46-0.070.270.070.06-0.160.30.10.24-0.05-0.08-0.38-0.01-0.03-0.07-0.08-0.27-0.3
CDC15 Synchronization [log2(ratio of mRNA levels)] link
103050708090100110120130140150160
-1-1.81-1.81-0.550.04-0.050.110.10.740.20.250.160.51
170180190200210220230240250270290
0-0.310.260.910.561.01-0.170.58-0.130.290.1
CDC28 (Stanford) [log2(ratio of mRNA levels)]
0102030405060708090100110120130140150160
-0.85-0.380.28-0.62-0.62-0.70.18-0.58-0.71.390.47N/A-0.480.510.960.790.35
Elutration Synchronization [log2(ratio of mRNA levels)] link
0306090120150180210240270300330360390
0.370.320.270.50.01-0.4-0.75-0.43-0.190.8130.47N/A-0.480.51