YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

5.3.1.9
4.1.2.13
5.3.1.1
1.2.1.12
2.7.2.3
5.4.2.1
4.2.1.11
1.1.1.49
1.1.1.44
5.1.3.1
5.3.1.6
2.2.1.1
4.1.3.7
4.2.1.3
1.1.1.42
1.3.9.91
4.2.1.2
1.1.1.37

Pathway View
ENZYME: 1.2.1.12 1.2.1.12

FLUX VALUES
Flux variation (Standard deviation):15.143
FluxBSUBECOLHPYLHINFSCER
Normal16815070140171.7
Absolute1.6815.770140171.74
Seq IDbsugapBecob1779hpyHP0921hinHI0001sceYGR192C

PERCENTAGE IDENTITY
Average PID: 0.705
% IDBSUBECOLHPYLHINFSCER
BSUB1.0000.5030.4150.4790.486
ECOL0.5031.0000.40.8320.683
HPYL0.4150.4791.0000.3980.402
HINF0.4790.8320.6831.0000.659
SCER0.4860.6830.4020.6591.000

EXPRESSION DATA
Multi-scale Reference: 3.6 copies per cell

Standard Deviation of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaverage
STDEV0.7300.2310.2280.4270.3360.8660.470
Average of Expression Change
Experimentcellcycle_cdc15cellcycle_alphadiauxyeast_sporuecoli_UVwormaveragestdev
STDEV-0.0750.3570.242-0.2580.4530.9180.2730.415

EXPRESSION TIMEPOINTS
Mitotic Cell Cycle [normalized transcript level divided by mean value] link
0102030405060708090100110120130140150160
622545515450277237220201198314371391337317382389422
Alpha Factor Arrest Synchronization [log2(ratio of mRNA levels)] link
0714212835424956637077849198105112119
0.11-0.460.250.040.310.170.510.230.110.04-0.07-0.450.1-0.380.2-0.35-0.08-0.27
CDC15 Synchronization [log2(ratio of mRNA levels)] link
103050708090100110120130140150160
-0.84-1.37-1.4-0.54-0.520.040.140.220.670.210.170.240.13
170180190200210220230240250270290
-0.010.080.390.470.680.99-0.7-0.170.390.380.34
CDC28 (Stanford) [log2(ratio of mRNA levels)]
0102030405060708090100110120130140150160
0.840.650.570.38-0.32-0.55-0.66-0.79-0.81-0.140.10.17-0.04N/A0.140.170.28
Elutration Synchronization [log2(ratio of mRNA levels)] link
0306090120150180210240270300330360390
0.810.170.60.16-0.01-0.36-0.83-0.31-0.070.8320.10.17-0.04N/A