Holstege Jelinsky Roth-a Roth-alpha Roth-gal Roth-heat SAGE-GM SAGE-L SAGE-S Amino Acid T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G T-count T G-count G A 347806.6 7.31 141890 5.51 342623.4 7.7 152984 5.51 63881.3 7.22 154998 5.51 53555.7 7.88 154998 5.51 57562.8 7.33 154998 5.51 65484.7 7.47 154998 5.51 485161 7.54 88466 5.56 206649 7.78 86980 5.55 749194 7.57 88466 5.56 C 54215.4 1.14 32566 1.26 51006.3 1.15 36219 1.31 10761 1.22 36880 1.31 8007.6 1.18 36880 1.31 9399.6 1.2 36880 1.31 10686 1.22 36880 1.31 64603 1 19311 1.21 25159 0.95 19052 1.22 98212 0.99 19311 1.21 D 262495.2 5.52 151402 5.88 239567.3 5.38 161304 5.81 48280.7 5.46 163223 5.8 36013.9 5.3 163223 5.8 42789.2 5.45 163223 5.8 48439.2 5.53 163223 5.8 364846 5.67 94880 5.97 152150 5.73 93421 5.97 563430 5.69 94880 5.97 E 311727.7 6.55 170416 6.62 287647.7 6.46 181878 6.55 55110.3 6.23 183860 6.54 41707 6.14 183860 6.54 48862.4 6.22 183860 6.54 54051.5 6.17 183860 6.54 438814 6.82 106793 6.71 175815 6.62 105089 6.71 671031 6.78 106793 6.71 F 198333.6 4.17 114808 4.46 182865.6 4.11 125472 4.52 38337.4 4.33 127396 4.53 28808.5 4.24 127396 4.53 33806.9 4.31 127396 4.53 37764.8 4.31 127396 4.53 273274 4.24 70597 4.44 111340 4.19 69581 4.44 419992 4.24 70597 4.44 G 295713.2 6.21 128756 5 287622.2 6.46 138762 5 54075.7 6.11 140840 5.01 43813.1 6.45 140840 5.01 48952.4 6.24 140840 5.01 55129.2 6.29 140840 5.01 407130 6.32 80251 5.05 170395 6.42 79026 5.05 627862 6.34 80251 5.05 H 95865.2 2.01 54951 2.13 89558 2.01 59255 2.14 18267.1 2.07 60086 2.14 13951.8 2.05 60086 2.14 16346.1 2.08 60086 2.14 18127.1 2.07 60086 2.14 140041 2.18 34251 2.15 55711 2.1 33786 2.16 214585 2.17 34251 2.15 I 291677.1 6.13 168254 6.53 265212.8 5.96 181633 6.55 55577.1 6.28 184248 6.55 41474.1 6.1 184248 6.55 48894.9 6.23 184248 6.55 54197.4 6.18 184248 6.55 395198 6.14 103982 6.54 161089 6.07 102438 6.54 607746 6.14 103982 6.54 K 373235.3 7.84 189753 7.37 360448.9 8.1 202960 7.31 65679 7.43 205472 7.3 50439.4 7.42 205472 7.3 58037.7 7.39 205472 7.3 63604.1 7.26 205472 7.3 512577 7.96 118072 7.42 207289 7.81 116111 7.42 778988 7.87 118072 7.42 L 415771.8 8.74 247035 9.59 378096.6 8.49 266333 9.6 79187.1 8.95 269997 9.6 58973.5 8.68 269997 9.6 70086.3 8.93 269997 9.6 77238.1 8.81 269997 9.6 576016 8.95 153155 9.63 242072 9.12 150846 9.63 888266 8.98 153155 9.63 M 96230 2.02 53555 2.08 88114.9 1.98 57905 2.09 17920.3 2.03 58731 2.09 13551.7 1.99 58731 2.09 15800.1 2.01 58731 2.09 17638.9 2.01 58731 2.09 133297 2.07 33120 2.08 52679 1.98 32607 2.08 203778 2.06 33120 2.08 N 238516.3 5.01 157111 6.1 213753.3 4.8 168508 6.07 45939.5 5.19 170772 6.07 33353.1 4.91 170772 6.07 40046 5.1 170772 6.07 44613.8 5.09 170772 6.07 324957 5.05 96864 6.09 133854 5.04 95379 6.09 499727 5.05 96864 6.09 P 198428.6 4.17 110651 4.3 185046.7 4.16 119554 4.31 37549.7 4.25 121503 4.32 28909.5 4.25 121503 4.32 33565.8 4.28 121503 4.32 37677.8 4.3 121503 4.32 270224 4.2 68113 4.28 114582 4.31 67047 4.28 419039 4.23 68113 4.28 Q 177603.8 3.73 101269 3.93 166553 3.74 108472 3.91 32053.7 3.62 109753 3.9 24369.8 3.59 109753 3.9 28321.9 3.61 109753 3.9 31881.7 3.64 109753 3.9 225927 3.51 62232 3.91 93525 3.52 61141 3.9 347350 3.51 62232 3.91 R 227879.3 4.79 114930 4.46 222265.7 4.99 123863 4.46 39775.1 4.5 125539 4.46 30995.3 4.56 125539 4.46 34935.1 4.45 125539 4.46 37358.1 4.26 125539 4.46 288994 4.49 70026 4.4 115666 4.36 68963 4.4 438305 4.43 70026 4.4 S 370944.5 7.8 230461 8.95 333411.1 7.49 249731 9 72370.9 8.18 253423 9.01 53913 7.93 253423 9.01 63706.8 8.12 253423 9.01 71836.7 8.2 253423 9.01 483946 7.52 140594 8.84 201030 7.57 138329 8.83 746142 7.54 140594 8.84 T 281166 5.91 150060 5.83 259931.7 5.84 162370 5.85 53155.9 6.01 164532 5.85 41732.1 6.14 164532 5.85 47515.9 6.05 164532 5.85 54041.4 6.17 164532 5.85 353242 5.49 90632 5.7 148149 5.58 89208 5.7 547771 5.53 90632 5.7 V 320039.6 6.73 144459 5.61 310753.1 6.98 155874 5.62 58379 6.6 158024 5.62 46804.9 6.89 158024 5.62 52348 6.67 158024 5.62 58394 6.66 158024 5.62 422703 6.57 89770 5.64 177802 6.7 88384 5.64 650838 6.58 89770 5.64 W 48209.1 1.01 26896 1.04 44321.2 1 29134 1.05 9423.1 1.07 29596 1.05 7158.7 1.05 29596 1.05 8368.8 1.07 29596 1.05 9436.7 1.08 29596 1.05 68298 1.06 16544 1.04 27752 1.05 16345 1.04 104914 1.06 16544 1.04 X 0.4 0 1 0 2.1 0 1 0 0.2 0 1 0 0.2 0 1 0 0.2 0 1 0 0.5 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 Y 152582.2 3.21 85652 3.33 142347.3 3.2 92716 3.34 28788.7 3.25 94017 3.34 22164.8 3.26 94017 3.34 25594 3.26 94017 3.34 28804.7 3.29 94017 3.34 208737 3.24 52857 3.32 82821 3.12 52098 3.33 319662 3.23 52857 3.32 T-count: no. of times feature occurs weighted by expression level T: transcriptome composition G-count: no. of times feature occurs in genome G: genome composition