YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Report on SCOP Fold corresponding to representative domain d2a0b__ [SCOP 1.39 Fold 1.024]

  Interaction Report for Fold 1.024

  Function Classification
 Augmented Flybase+ENZYMEGenProtECMIPS
d2a0b__E-2.7.3.-NONO
  Rankings
O C C U R R E N C E S
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Number 9614110324109537001000000
Rank 581576811221045610520043581219115339102127124135137136
%ile 83894140052773608172941060111101
A L I G N M E N T S
  Aligned PairsUntrimmed RMSTrimmed RMS% Seq IdentityStructure P-ValueSequence P-Value 
FOLD
(General)
1375.041.5323.581.82e-047.39e-01
Rank 21127971197486
%ile 904155456660
FOLD (Exclusive) 966.051.8915.942.59e-041
Rank 8363523261
%ile 863739605498
E X P R E S S I O N
Absolute Reference GenomeReference TranscriptomeWild-type (Jelinsky)Wild-type (Holstege)SAGEMating-type (A)Mating-type (Alpha)GALHeat Shock 
%%E%E%E%E%E%E%E%E
Value 0.1--0.8--0.9--0.8--0.90.1-0.5--0.80.1-0.6--0.7
Rank 1041461661471811521741231799612815215998145147154
%ile 5232233216291943175541292654333229
Ratio Reference GenomeReference TranscriptomeCDC28 (Yeast)CDC15 (Yeast)Alpha (Yeast)Diauxic Shift (Yeast)Sporulation (Yeast)Heat Shock (E.coli)Development (Worm)
Value 0.170.030.140.180.250.48--0.66
Rank 851421011811458190190182
Value 725467415397393941
M I S C E L L A N E O U S
   Rank%ile Year IdentifiedRank%ile
SIZE 129 24641AGE764044
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Occurrences:Size 0.7440.1090.0080.00800.0230.1860.00800.0700.0390.287000.008000000
Rank 4510748212298501062003952519215353103128125136137137
%ile 86934340155803608375971147111111
  List of identifiers associated with Fold 1.024.
d1a0b__ d1a7va_ d1a7vb_ d1apc__ d1avo.1 d1avo.2 d1avo.3 d1avo.4 d1avo.5 d1avo.6
d1avo.7 d1bbha_ d1bbhb_ d1buca1 d1bucb1 d1cgme_ d1cgn__ d1cgo__ d1cpq__ d1cpr__
d1egca1 d1egcb1 d1egcc1 d1egcd1 d1egda1 d1egdb1 d1egdc1 d1egdd1 d1egea1 d1egeb1
d1egec1 d1eged1 d1fapb_ d1hmda_ d1hmdb_ d1hmdc_ d1hmdd_ d1hmoa_ d1hmob_ d1hmoc_
d1hmod_ d1hr3a_ d1hr3b_ d1hr3c_ d1hrb__ d1ivha1 d1ivhb1 d1ivhc1 d1ivhd1 d1jafa_
d1jafb_ d1le2__ d1le4__ d1lih__ d1lpe__ d1nbba_ d1nbbb_ d1nfn__ d1nfo__ d1nsgb_
d1rcpa_ d1rcpb_ d1rmva_ d1vls__ d1vlta_ d1vltb_ d1vtmp_ d1was__ d1wata_ d1watb_
d256ba_ d256bb_ d2a0b__ d2asr__ d2ccya_ d2ccyb_ d2hmqa_ d2hmqb_ d2hmqc_ d2hmqd_
d2hmza_ d2hmzb_ d2hmzc_ d2hmzd_ d2liga_ d2ligb_ d2mhr__ d2tmvp_ d3mdda1 d3mddb1
d3mdea1 d3mdeb1

Scop information.
RCSB PDB information.
fold_occurrences,96,58,83,#fdebe3,14,15,89,#fde8e3,1,76,41,#effde3,1,81,40,#ecfde3,0,122,0,#edf6f3,3,104,52,#f7fde3,24,56,77,#fdeee3,1,105,36,#ecfde3,0,200,0,#edf6f3,9,43,81,#fdebe3,5,58,72,#fdf4e3,37,12,94,#fde5e3,0,191,1,#edf6f3,0,153,0,#edf6f3,1,39,60,#fafde3,0,102,1,#edf6f3,0,127,1,#edf6f3,0,124,1,#edf6f3,0,135,1,#edf6f3,0,137,0,#edf6f3,0,136,1,#edf6f3,fold_alignmnents,137,21,90,#fde5e3,5.04,127,41,#fdf7e3,1.53,97,55,#fdf4e3,23.58,119,45,#fdf7e3,1.82e-04,74,66,#fdebe3,7.39e-01,86,60,#fdeee3,0,202,26,#eff6f3,.,202,26,#eff6f3,.,202,26,#eff6f3,.,202,26,#eff6f3,.,202,26,#eff6f3,.,202,26,#eff6f3,0,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,.,172,-202,#eff6f3,96,8,86,#fde5e3,6.05,36,37,#fdf7e3,1.89,35,39,#fdf4e3,15.94,23,60,#fdebe3,2.59e-04,26,54,#fdeee3,1,1,98,#fde3e3,0,91,-60,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,0,172,-46,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,.,172,-17100,#eff6f3,,0,100,#fde3e3,expression_abs,0.1,104,52,#f7fde3,-,146,32,#edf6f3,-0.8,166,23,#e3fde6,-,147,32,#edf6f3,-0.9,181,16,#e3fdea,-,152,29,#edf6f3,-0.8,174,19,#e3fde6,-,123,43,#edf6f3,-0.9,179,17,#e3fdea,0.1,96,55,#fafde3,-0.5,128,41,#effde3,-,152,29,#edf6f3,-0.8,159,26,#e3fde3,0.1,98,54,#f7fde3,-0.6,145,33,#e7fde3,-,147,32,#edf6f3,-0.7,154,29,#e3fde3,expression_ratio,0.17,85,72,#fdfce3,0.03,142,54,#e7fde3,0.14,101,67,#f7fde3,0.18,181,41,#e3fdea,0.25,145,53,#e7fde3,0.48,8,97,#fde3e3,-,190,39,#e3fdf1,-,190,39,#e3fdf1,0.66,182,41,#e3fdea,miscellaneous,129,246,41,#effde3,0.744,45,86,#fde8e3,0.109,10,93,#fde5e3,0.008,74,43,#effde3,0.008,82,40,#ecfde3,0,122,1,#edf6f3,0.023,98,55,#f7fde3,0.186,50,80,#fdeee3,0.008,106,36,#e7fde3,0,200,0,#edf6f3,0.070,39,83,#fdebe3,0.039,52,75,#fdf4e3,0.287,5,97,#fde3e3,0,192,1,#edf6f3,0,153,1,#edf6f3,0.008,53,47,#effde3,0,103,1,#edf6f3,0,128,1,#edf6f3,0,125,1,#edf6f3,0,136,1,#edf6f3,0,137,1,#edf6f3,0,137,1,#edf6f3,76,404,4,#e3fdfa