YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Report on SCOP Fold corresponding to representative domain d1vib__ [SCOP 1.39 Fold 7.002]

  Interaction Report for Fold 7.002

  Function Classification
 Augmented Flybase+ENZYMEGenProtECMIPS
d1vib__J-toxinNONO
  Rankings
O C C U R R E N C E S
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Number 100001000000000000000
Rank 31914812913612215324816320023020920019115396102127124135137136
%ile 6000029010200104111101
E X P R E S S I O N
Absolute Reference GenomeReference TranscriptomeWild-type (Jelinsky)Wild-type (Holstege)SAGEMating-type (A)Mating-type (Alpha)GALHeat Shock 
%%E%E%E%E%E%E%E%E
Value ---0.9--1.0--0.9--1.0--0.3--0.8--0.5--0.6
Rank 15314619314720415219812319615588152159157119147130
%ile 2932113262984392859292627453240
Ratio Reference GenomeReference TranscriptomeCDC28 (Yeast)CDC15 (Yeast)Alpha (Yeast)Diauxic Shift (Yeast)Sporulation (Yeast)Heat Shock (E.coli)Development (Worm)
Value
Rank
Value
M I S C E L L A N E O U S
   Rank%ile Year IdentifiedRank%ile
SIZE miscellaneous 51398AGE#edf6f395119
Species 20AfulMjanMthePhorScerCeleAaeoSyneEcolBsubMtubHinfHpylMgenMpneBburTpalCtraCpneRpro
Occurrences:Size #e3fdfa#e3fdf1#edf6f3#edf6f3#edf6f3#edf6f3#f3fde3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3#edf6f3
Rank 0.02000000.020000000000000000
%ile 298148129136122108249164200234209200192153100103128125136137137
  List of identifiers associated with Fold 7.002.
d1ehs__ d1vib__

Scop information.
RCSB PDB information.
fold_occurrences,1,319,6,#e3fdf5,0,148,0,#edf6f3,0,129,0,#edf6f3,0,136,0,#edf6f3,0,122,0,#edf6f3,1,153,29,#e3fde3,0,248,0,#edf6f3,0,163,1,#edf6f3,0,200,0,#edf6f3,0,230,2,#edf6f3,0,209,0,#edf6f3,0,200,0,#edf6f3,0,191,1,#edf6f3,0,153,0,#edf6f3,0,96,4,#edf6f3,0,102,1,#edf6f3,0,127,1,#edf6f3,0,124,1,#edf6f3,0,135,1,#edf6f3,0,137,0,#edf6f3,0,136,1,#edf6f3,fold_alignments,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,expression_abs,-,153,29,#edf6f3,-,146,32,#edf6f3,-0.9,193,11,#e3fdf1,-,147,32,#edf6f3,-1.0,204,6,#e3fdf5,-,152,29,#edf6f3,-0.9,198,8,#e3fdf5,-,123,43,#edf6f3,-1.0,196,9,#e3fdf1,-,155,28,#edf6f3,-0.3,88,59,#fafde3,-,152,29,#edf6f3,-0.8,159,26,#e3fde3,-,157,27,#edf6f3,-0.5,119,45,#f3fde3,-,147,32,#edf6f3,-0.6,130,40,#effde3,expression_ratio,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,miscellaneous,51,398,5,#e3fdfa,0.020,298,12,#e3fdf1,0,148,1,#edf6f3,0,129,1,#edf6f3,0,136,1,#edf6f3,0,122,1,#edf6f3,0.020,108,50,#f3fde3,0,249,0,#edf6f3,0,164,1,#edf6f3,0,200,0,#edf6f3,0,234,0,#edf6f3,0,209,0,#edf6f3,0,200,0,#edf6f3,0,192,1,#edf6f3,0,153,1,#edf6f3,0,100,1,#edf6f3,0,103,1,#edf6f3,0,128,1,#edf6f3,0,125,1,#edf6f3,0,136,1,#edf6f3,0,137,1,#edf6f3,0,137,1,#edf6f3,95,119,71,#fdf4e3