Report on Structure d1rot_

Report on SCOP Fold corresponding to representative domain d1rot__ [SCOP 1.39 Fold 4.019]

Interaction Report for Fold 4.019

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1rot__ E-5.2.1.8 NO NO

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 58 1 2 1 1 4 13 0 2 8 2 1 5 3 2 2 1 3 2 2 3

Rank 82 91 45 81 72 82 84 163 91 45 112 125 28 32 21 25 59 24 38 39 23

%ile 76 38 65 40 41 62 66 1 54 81 46 38 85 79 78 75 53 80 72 71 83

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 13 3.13 0.76 43.31 6.76e-05 2.30e-01
Rank 78 175 160 41 85 140
%ile 64 19 26 81 61 35
FOLD (Exclusive) 3 4.68 1.80 17.29 2.93e-04 1
Rank 36 52 42 8 24 1
%ile 37 9 26 86 58 98
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 0.2 0.4 1.1 0.8 3.8 0.5 1.7 0.3 1.1 0.5 1.9 1.1 5.4 0.8 3.7 0.6 2.3
Rank 79 44 26 29 13 45 22 48 22 41 19 23 12 30 12 36 22
%ile 63 79 88 86 94 79 89 77 89 81 91 89 94 86 94 83 89
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value 0.23 0.40 0.34 0.25 0.38 0.13 0.28 0.17 1.22
Rank 71 42 23 86 40 187 113 171 59
Value 77 86 92 72 87 40 63 45 81
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 105 294 30 AGE 91 285 32
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 0.552 0.010 0.019 0.010 0.010 0.038 0.124 0 0.019 0.076 0.019 0.010 0.048 0.029 0.019 0.019 0.010 0.029 0.019 0.019 0.029

Rank 60 79 34 77 65 70 64 164 75 32 93 121 20 23 20 25 62 17 32 31 19

%ile 82 47 73 43 47 67 74 1 62 86 55 40 89 85 79 75 52 86 76 77 86

List of identifiers associated with Fold 4.019.

d1a7xa_ d1a7xb_ d1bkf__ d1ctn_3 d1fapa_ d1fkb__ d1fkd__ d1fkf__ d1fkg__ d1fkh__
d1fkia_ d1fkib_ d1fkj__ d1fkk__ d1fkl__ d1fkr__ d1fks__ d1fkt__ d1grj_2 d1nsga_
d1pbk__ d1rot__ d1rou__ d1tcoc_ d1yat__ d2fke__ ds044__

Scop information.
RCSB PDB information.

fold_occurrences,58,82,76,#fdeee3,1,91,38,#ecfde3,2,45,65,#fdfce3,1,81,40,#ecfde3,1,72,41,#effde3,4,82,62,#fdfce3,13,84,66,#fdf7e3,0,163,1,#edf6f3,2,91,54,#f7fde3,8,45,81,#fdeee3,2,112,46,#f3fde3,1,125,38,#ecfde3,5,28,85,#fdebe3,3,32,79,#fdeee3,2,21,78,#fdeee3,2,25,75,#fdf4e3,1,59,53,#f7fde3,3,24,80,#fdeee3,2,38,72,#fdf4e3,2,39,71,#fdf4e3,3,23,83,#fdebe3,fold_alignmnents,13,78,64,#fdeee3,3.13,175,19,#f7fde3,0.76,160,26,#fafde3,43.31,41,81,#fde8e3,6.76e-05,85,61,#fdeee3,2.30e-01,140,35,#fdfce3,10,67,75,#e3fdfa,2.67,162,41,#e3fdfa,0.45,166,39,#e3fdfa,51.12,23,92,#fafde3,8.61e-11,124,55,#e3fdfa,1.12e-18,163,40,#e3fdfa,10,41,28,#fdebe3,2.67,123,-116,#f7fde3,0.45,123,-116,#f7fde3,51.12,31,46,#fde8e3,8.61e-11,91,-60,#fdf7e3,1.12e-18,118,-107,#fafde3,3,36,37,#fdf7e3,4.68,52,9,#fafde3,1.80,42,26,#fdfce3,17.29,8,86,#fde5e3,2.93e-04,24,58,#fdeee3,1,1,98,#fde3e3,0,91,-60,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,10,41,65,#e3fdfa,2.67,123,-12200,#e3fdfa,0.45,123,-12200,#e3fdfa,51.12,31,-3000,#e3fdfa,8.61e-11,91,-9000,#e3fdfa,,0,100,#fde3e3,expression_abs,0.2,79,63,#fdfce3,0.4,44,79,#fdeee3,1.1,26,88,#fde8e3,0.8,29,86,#fde8e3,3.8,13,94,#fde5e3,0.5,45,79,#fdeee3,1.7,22,89,#fde8e3,0.3,48,77,#fdeee3,1.1,22,89,#fde8e3,0.5,41,81,#fdebe3,1.9,19,91,#fde5e3,1.1,23,89,#fde8e3,5.4,12,94,#fde5e3,0.8,30,86,#fde8e3,3.7,12,94,#fde5e3,0.6,36,83,#fdebe3,2.3,22,89,#fde8e3,expression_ratio,0.23,71,77,#fdf7e3,0.40,42,86,#fdebe3,0.34,23,92,#fde8e3,0.25,86,72,#fdfce3,0.38,40,87,#fdebe3,0.13,187,40,#e3fdf1,0.28,113,63,#f3fde3,0.17,171,45,#e3fde6,1.22,59,81,#fdf4e3,miscellaneous,105,294,30,#e3fde3,0.552,60,82,#fdebe3,0.010,79,47,#f3fde3,0.019,34,73,#fdf4e3,0.010,77,43,#effde3,0.010,65,47,#effde3,0.038,70,67,#fdf7e3,0.124,64,74,#fdf4e3,0,164,1,#edf6f3,0.019,75,62,#fdfce3,0.076,32,86,#fde8e3,0.019,93,55,#f7fde3,0.010,121,40,#ecfde3,0.048,20,89,#fde8e3,0.029,23,85,#fdebe3,0.019,20,79,#fdeee3,0.019,25,75,#fdf4e3,0.010,62,52,#f3fde3,0.029,17,86,#fdebe3,0.019,32,76,#fdeee3,0.019,31,77,#fdeee3,0.029,19,86,#fdebe3,91,285,32,#e7fde3