Report on Structure d1pkp

Report on SCOP Fold corresponding to representative domain d1pkp_1 [SCOP 1.39 Fold 4.010]

Interaction Report for Fold 4.010

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1pkp_1 D-1.2.10.1.1 NO NO

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 53 2 2 2 2 7 5 2 4 2 2 3 2 2 2 2 3 3 2 2 2

Rank 90 60 45 52 50 61 124 66 55 113 112 78 68 49 21 25 25 24 38 39 35

%ile 73 59 65 61 59 72 50 59 72 52 46 61 64 68 78 75 80 80 72 71 74

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 1 15.66 5.34 18.70 5.33e-01 1
Rank 169 9 10 170 4 13
%ile 22 96 95 21 98 94
FOLD (Exclusive) 0 . . . . .
Rank 57 57 57 57 57 57
%ile 0 0 0 0 0 0
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 0.3 1.4 3.7 1.4 3.7 1.4 3.5 1.5 4.1 1.0 2.3 1.4 3.6 1.0 2.5 1.0 2.4
Rank 59 15 11 21 14 17 12 15 9 25 15 16 15 21 17 24 20
%ile 72 93 94 90 93 92 94 93 95 88 93 92 93 90 92 88 90
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value - - 0.23 0.28 0.33 0.16 0.30 0.25 0.69
Rank 206 188 60 53 65 132 95 137 175
Value 33 39 80 83 79 57 69 56 43
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 110 283 33 AGE 93 223 47
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 0.482 0.018 0.018 0.018 0.018 0.064 0.045 0.018 0.036 0.018 0.018 0.027 0.018 0.018 0.018 0.018 0.027 0.027 0.018 0.018 0.018

Rank 69 53 37 50 39 47 107 51 44 103 96 65 57 40 23 27 16 19 35 32 34

%ile 79 64 71 63 68 78 57 69 78 56 54 67 70 74 76 73 87 84 74 76 75

List of identifiers associated with Fold 4.010.

d1dar_3 d1efga3 d1elo_3 d1pkp_1 ds043_1

Scop information.
RCSB PDB information.

fold_occurrences,53,90,73,#fdf4e3,2,60,59,#fafde3,2,45,65,#fdfce3,2,52,61,#fdfce3,2,50,59,#fafde3,7,61,72,#fdf4e3,5,124,50,#f3fde3,2,66,59,#fafde3,4,55,72,#fdf4e3,2,113,52,#f7fde3,2,112,46,#f3fde3,3,78,61,#fdfce3,2,68,64,#fdfce3,2,49,68,#fdf7e3,2,21,78,#fdeee3,2,25,75,#fdf4e3,3,25,80,#fdeee3,3,24,80,#fdeee3,2,38,72,#fdf4e3,2,39,71,#fdf4e3,2,35,74,#fdf4e3,fold_alignmnents,1,169,22,#fafde3,15.66,9,96,#fde3e3,5.34,10,95,#fde3e3,18.70,170,21,#fafde3,5.33e-01,4,98,#fde3e3,1,13,94,#fde3e3,1,147,46,#e3fdfa,15.66,12,96,#fdeee3,5.34,12,96,#fdeee3,18.70,177,35,#e3fdfa,5.33e-01,6,98,#fde8e3,1,9,97,#fdebe3,1,100,-75,#fdfce3,15.66,17,70,#fde5e3,5.34,15,74,#fde5e3,18.70,163,-186,#effde3,5.33e-01,6,89,#fde3e3,1,3,95,#fde3e3,0,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,0,91,-60,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,1,100,15,#e3fdfa,15.66,17,-1600,#e3fdfa,5.34,15,-1400,#e3fdfa,18.70,163,-16200,#e3fdfa,5.33e-01,6,-500,#e3fdfa,,0,100,#fde3e3,expression_abs,0.3,59,72,#fdf4e3,1.4,15,93,#fde5e3,3.7,11,94,#fde5e3,1.4,21,90,#fde8e3,3.7,14,93,#fde5e3,1.4,17,92,#fde5e3,3.5,12,94,#fde5e3,1.5,15,93,#fde5e3,4.1,9,95,#fde5e3,1.0,25,88,#fde8e3,2.3,15,93,#fde5e3,1.4,16,92,#fde5e3,3.6,15,93,#fde5e3,1.0,21,90,#fde8e3,2.5,17,92,#fde5e3,1.0,24,88,#fde8e3,2.4,20,90,#fde8e3,expression_ratio,-,206,33,#e3fdf5,-,188,39,#e3fdf1,0.23,60,80,#fdf4e3,0.28,53,83,#fdeee3,0.33,65,79,#fdf7e3,0.16,132,57,#ecfde3,0.30,95,69,#fafde3,0.25,137,56,#ecfde3,0.69,175,43,#e3fdea,miscellaneous,110,283,33,#e7fde3,0.482,69,79,#fdeee3,0.018,53,64,#fdfce3,0.018,37,71,#fdf7e3,0.018,50,63,#fdfce3,0.018,39,68,#fdf7e3,0.064,47,78,#fdeee3,0.045,107,57,#fafde3,0.018,51,69,#fdf7e3,0.036,44,78,#fdeee3,0.018,103,56,#f7fde3,0.018,96,54,#f7fde3,0.027,65,67,#fdf7e3,0.018,57,70,#fdf7e3,0.018,40,74,#fdf4e3,0.018,23,76,#fdeee3,0.018,27,73,#fdf4e3,0.027,16,87,#fde8e3,0.027,19,84,#fdebe3,0.018,35,74,#fdf4e3,0.018,32,76,#fdeee3,0.018,34,75,#fdf4e3,93,223,47,#f3fde3