Report on Structure d1mat_

Report on SCOP Fold corresponding to representative domain d1mat__ [SCOP 1.39 Fold 4.077]

Interaction Report for Fold 4.077

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1mat__ E-3.4.11.18

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 62 2 2 2 4 7 8 2 4 4 4 4 2 2 2 2 2 3 2 2 2

Rank 76 60 45 52 31 61 105 66 55 80 73 68 68 49 21 25 34 24 38 39 35

%ile 77 59 65 61 74 72 58 59 72 66 65 66 64 68 78 75 73 80 72 71 74

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 3 6.79 1.23 21.75 6.04e-15 3.35e-01
Rank 130 85 125 135 179 135
%ile 40 61 42 38 17 38
FOLD (Exclusive) 0 . . . . .
Rank 57 57 57 57 57 57
%ile 0 0 0 0 0 0
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 0.3 0.2 -0.4 0.2 -0.5 0.2 -0.3 0.2 -0.6 0.1 -0.6 0.1 -0.6 0.1 -0.6 0.1 -0.6
Rank 59 66 106 72 122 77 118 59 131 96 146 93 131 98 145 99 130
%ile 72 69 51 66 43 64 45 72 39 55 32 57 39 54 33 54 40
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value 0.29 0.15 - 0.16 0.29 0.18 0.29 0.64 0.72
Rank 62 79 127 189 96 90 100 39 166
Value 80 74 59 39 69 71 68 87 46
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 228 112 73 AGE 92 255 39
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 0.272 0.009 0.009 0.009 0.018 0.031 0.035 0.009 0.018 0.018 0.018 0.018 0.009 0.009 0.009 0.009 0.009 0.013 0.009 0.009 0.009

Rank 109 83 69 78 39 82 125 99 77 103 96 86 109 73 48 57 69 43 75 70 62

%ile 68 44 47 43 68 62 50 40 61 56 54 57 43 52 52 45 46 65 45 49 55

List of identifiers associated with Fold 4.077.

d1chma2 d1chmb2 d1mat__ d1xgma2 d1xgmb2 d1xgna2 d1xgnb2 d1xgo_2 d1xgsa2 d1xgsb2

Scop information.
RCSB PDB information.

fold_occurrences,62,76,77,#fdeee3,2,60,59,#fafde3,2,45,65,#fdfce3,2,52,61,#fdfce3,4,31,74,#fdf4e3,7,61,72,#fdf4e3,8,105,58,#fafde3,2,66,59,#fafde3,4,55,72,#fdf4e3,4,80,66,#fdf7e3,4,73,65,#fdfce3,4,68,66,#fdf7e3,2,68,64,#fdfce3,2,49,68,#fdf7e3,2,21,78,#fdeee3,2,25,75,#fdf4e3,2,34,73,#fdf4e3,3,24,80,#fdeee3,2,38,72,#fdf4e3,2,39,71,#fdf4e3,2,35,74,#fdf4e3,fold_alignmnents,3,130,40,#fdf7e3,6.79,85,61,#fdeee3,1.23,125,42,#fdf7e3,21.75,135,38,#fdfce3,6.04e-15,179,17,#f7fde3,3.35e-01,135,38,#fdfce3,3,109,60,#e3fdfa,6.79,72,74,#e3fdfa,1.23,94,66,#e3fdfa,21.75,145,47,#e3fdfa,6.04e-15,158,42,#e3fdfa,3.35e-01,102,63,#e3fdfa,3,74,-30,#fdf4e3,6.79,63,-11,#fdeee3,1.23,59,-4,#fdeee3,21.75,150,-163,#effde3,6.04e-15,124,-118,#f7fde3,3.35e-01,44,23,#fdebe3,0,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,0,91,-60,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,.,91,23,#eff6f3,3,74,37,#e3fdfa,6.79,63,-6200,#e3fdfa,1.23,59,-5800,#e3fdfa,21.75,150,-14900,#e3fdfa,6.04e-15,124,-12300,#e3fdfa,,0,100,#fde3e3,expression_abs,0.3,59,72,#fdf4e3,0.2,66,69,#fdf7e3,-0.4,106,51,#f7fde3,0.2,72,66,#fdf7e3,-0.5,122,43,#effde3,0.2,77,64,#fdfce3,-0.3,118,45,#f3fde3,0.2,59,72,#fdf4e3,-0.6,131,39,#ecfde3,0.1,96,55,#fafde3,-0.6,146,32,#e7fde3,0.1,93,57,#fafde3,-0.6,131,39,#ecfde3,0.1,98,54,#f7fde3,-0.6,145,33,#e7fde3,0.1,99,54,#f7fde3,-0.6,130,40,#effde3,expression_ratio,0.29,62,80,#fdf4e3,0.15,79,74,#fdfce3,-,127,59,#effde3,0.16,189,39,#e3fdf1,0.29,96,69,#fafde3,0.18,90,71,#fafde3,0.29,100,68,#f7fde3,0.64,39,87,#fdebe3,0.72,166,46,#e3fde6,miscellaneous,228,112,73,#fdf4e3,0.272,109,68,#fdf7e3,0.009,83,44,#effde3,0.009,69,47,#effde3,0.009,78,43,#effde3,0.018,39,68,#fdf7e3,0.031,82,62,#fdfce3,0.035,125,50,#f3fde3,0.009,99,40,#ecfde3,0.018,77,61,#fdfce3,0.018,103,56,#f7fde3,0.018,96,54,#f7fde3,0.018,86,57,#fafde3,0.009,109,43,#effde3,0.009,73,52,#f7fde3,0.009,48,52,#f7fde3,0.009,57,45,#effde3,0.009,69,46,#effde3,0.013,43,65,#fdfce3,0.009,75,45,#effde3,0.009,70,49,#f3fde3,0.009,62,55,#f7fde3,92,255,39,#ecfde3