Report on Structure d1llc

Report on SCOP Fold corresponding to representative domain d1llc_2 [SCOP 1.39 Fold 4.100]

Interaction Report for Fold 4.100

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1llc_2 E-1.1.1.27 NO NO

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 785 31 16 26 19 72 132 33 59 79 98 124 25 21 4 5 5 5 10 10 9

Rank 5 6 7 4 5 10 14 2 3 3 1 1 4 4 9 8 13 12 4 4 4

%ile 98 95 94 96 95 95 94 98 98 98 99 99 97 97 90 91 89 90 96 96 96

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 752 6.85 2.13 20.54 8.84e-03 8.02e-01
Rank 3 82 57 144 43 77
%ile 99 62 74 33 80 64
FOLD (Exclusive) 0 . . . . .
Rank 57 57 57 57 57 57
%ile 0 0 0 0 0 0
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 3.1 3.6 0.2 5.5 0.8 4.6 0.6 2.8 -0.1 6.8 1.2 5.9 0.9 8.1 1.6 6.8 1.2
Rank 10 6 52 4 39 4 47 8 92 2 30 2 37 1 27 2 33
%ile 95 97 76 98 82 98 78 96 57 99 86 99 82 99 87 99 84
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value 2.74 3.62 0.28 0.28 0.29 0.20 0.46 0.51 1.05
Rank 6 3 41 53 96 71 43 56 92
Value 98 99 86 83 69 77 86 82 70
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 192 152 64 AGE 74 418 0
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 4.089 0.161 0.083 0.135 0.099 0.375 0.688 0.172 0.307 0.411 0.510 0.656 0.130 0.109 0.021 0.026 0.026 0.026 0.052 0.052 0.047

Rank 9 7 9 6 5 13 21 3 3 3 1 2 5 4 16 11 17 21 5 5 6

%ile 97 95 92 95 95 94 91 98 98 98 99 99 97 97 83 89 86 83 96 96 95

List of identifiers associated with Fold 4.100.

d1bdma2 d1bdmb2 d1bmda2 d1bmdb2 d1emd_2 d1hlpa2 d1hlpb2 d1hyha2 d1hyhb2 d1hyhc2
d1hyhd2 d1ldb_2 d1ldg_2 d1ldm_2 d1ldna2 d1ldnb2 d1ldnc2 d1ldnd2 d1ldne2 d1ldnf2
d1ldng2 d1ldnh2 d1llc_2 d1llda2 d1lldb2 d1lthr2 d1ltht2 d1mlda2 d1mldb2 d1mldc2
d1mldd2 d2cmd_2 d2ldb_2 d2ldx_2 d3ldh_2 d4mdha2 d4mdhb2 d5ldh_2 d6ldh_2 d8ldh_2
d9ldba2 d9ldbb2 d9ldta2 d9ldtb2

Scop information.
RCSB PDB information.

fold_occurrences,785,5,98,#fde3e3,31,6,95,#fde5e3,16,7,94,#fde5e3,26,4,96,#fde3e3,19,5,95,#fde5e3,72,10,95,#fde5e3,132,14,94,#fde5e3,33,2,98,#fde3e3,59,3,98,#fde3e3,79,3,98,#fde3e3,98,1,99,#fde3e3,124,1,99,#fde3e3,25,4,97,#fde3e3,21,4,97,#fde3e3,4,9,90,#fde8e3,5,8,91,#fde5e3,5,13,89,#fde8e3,5,12,90,#fde8e3,10,4,96,#fde3e3,10,4,96,#fde3e3,9,4,96,#fde3e3,fold_alignmnents,752,3,99,#fde3e3,6.85,82,62,#fdeee3,2.13,57,74,#fdebe3,20.54,144,33,#fdfce3,8.84e-03,43,80,#fde8e3,8.02e-01,77,64,#fdeee3,752,2,99,#fde3e3,6.85,69,75,#e3fdfa,2.13,49,82,#e3fdf1,20.54,152,44,#e3fdfa,8.84e-03,41,85,#e3fde3,8.02e-01,52,81,#e3fdf5,66,12,79,#fde3e3,9.84,34,40,#fde8e3,2.60,28,51,#fde8e3,23.60,145,-154,#f3fde3,2.52e-02,24,58,#fde5e3,4.87e-01,32,44,#fde8e3,0,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,530,2,96,#e3fdfa,6.52,39,67,#e3fdfa,2.08,28,76,#e3fdfa,16.87,40,66,#e3fdfa,1.14e-04,29,75,#e3fdfa,9.98e-01,70,41,#e3fdfa,66,12,90,#e3fdfa,9.84,34,-3300,#e3fdfa,2.60,28,-2700,#e3fdfa,23.60,145,-14400,#e3fdfa,2.52e-02,24,-2300,#e3fdfa,,0,100,#fde3e3,expression_abs,3.1,10,95,#fde5e3,3.6,6,97,#fde3e3,0.2,52,76,#fdeee3,5.5,4,98,#fde3e3,0.8,39,82,#fdebe3,4.6,4,98,#fde3e3,0.6,47,78,#fdeee3,2.8,8,96,#fde3e3,-0.1,92,57,#fafde3,6.8,2,99,#fde3e3,1.2,30,86,#fde8e3,5.9,2,99,#fde3e3,0.9,37,82,#fdebe3,8.1,1,99,#fde3e3,1.6,27,87,#fde8e3,6.8,2,99,#fde3e3,1.2,33,84,#fdebe3,expression_ratio,2.74,6,98,#fde3e3,3.62,3,99,#fde3e3,0.28,41,86,#fdebe3,0.28,53,83,#fdeee3,0.29,96,69,#fafde3,0.20,71,77,#fdf7e3,0.46,43,86,#fdeee3,0.51,56,82,#fdf4e3,1.05,92,70,#fafde3,miscellaneous,192,152,64,#fdfce3,4.089,9,97,#fde3e3,0.161,7,95,#fde5e3,0.083,9,92,#fde5e3,0.135,6,95,#fde5e3,0.099,5,95,#fde5e3,0.375,13,94,#fde5e3,0.688,21,91,#fde5e3,0.172,3,98,#fde3e3,0.307,3,98,#fde3e3,0.411,3,98,#fde3e3,0.510,1,99,#fde3e3,0.656,2,99,#fde3e3,0.130,5,97,#fde3e3,0.109,4,97,#fde3e3,0.021,16,83,#fdebe3,0.026,11,89,#fde8e3,0.026,17,86,#fde8e3,0.026,21,83,#fdebe3,0.052,5,96,#fde3e3,0.052,5,96,#fde3e3,0.047,6,95,#fde5e3,74,418,0,#e3fdfa