Report on Structure d1gnd

Report on SCOP Fold corresponding to representative domain d1gnd_2 [SCOP 1.39 Fold 4.012]

Interaction Report for Fold 4.012

Function Classification

Augmented Flybase+ENZYME GenProtEC MIPS
d1gnd_2 E-1.15.1.1 NO NO

Rankings

O C C U R R E N C E S

Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Number 400 34 9 13 18 21 28 26 20 38 31 42 11 6 7 8 4 6 5 4 9

Rank 13 4 14 10 7 24 52 5 12 7 8 10 16 14 6 5 18 9 13 19 4

%ile 96 97 88 92 93 89 79 96 94 97 96 95 91 90 93 94 85 92 90 86 96

A L I G N M E N T S

Aligned Pairs Untrimmed RMS Trimmed RMS % Seq Identity Structure P-Value Sequence P-Value

FOLD
(General) 152 10.26 2.93 20.47 4.36e-02 7.70e-01
Rank 19 36 27 146 26 83
%ile 91 83 88 32 88 62
FOLD (Exclusive) 0 . . . . .
Rank 57 57 57 57 57 57
%ile 0 0 0 0 0 0
E X P R E S S I O N

Absolute Reference Genome Reference Transcriptome Wild-type (Jelinsky) Wild-type (Holstege) SAGE Mating-type (A) Mating-type (Alpha) GAL Heat Shock
% % E % E % E % E % E % E % E % E
Value 0.9 0.8 -0.2 0.6 -0.2 1.0 0.2 0.7 -0.3 0.9 - 0.9 - 0.9 - 0.8 -0.1
Rank 21 30 85 40 89 26 69 28 101 28 67 28 71 25 74 29 80
%ile 90 86 60 81 59 88 68 87 53 87 69 87 67 88 65 86 63
Ratio Reference Genome Reference Transcriptome CDC28 (Yeast) CDC15 (Yeast) Alpha (Yeast) Diauxic Shift (Yeast) Sporulation (Yeast) Heat Shock (E.coli) Development (Worm)
Value 0.12 0.53 0.31 0.27 0.31 0.21 0.40 0.36 1.13
Rank 105 37 29 64 78 66 53 84 70
Value 66 88 90 79 75 78 83 73 77
M I S C E L L A N E O U S

Rank %ile Year Identified Rank %ile

SIZE 192 152 64 AGE 87 354 16
Species 20 Aful Mjan Mthe Phor Scer Cele Aaeo Syne Ecol Bsub Mtub Hinf Hpyl Mgen Mpne Bbur Tpal Ctra Cpne Rpro

Occurrences:Size 2.083 0.177 0.047 0.224 0.094 0.109 0.146 0.135 0.104 0.203 0.161 0.219 0.057 0.031 0.036 0.188 0.021 0.036 0.026 0.021 0.047

Rank 18 5 16 3 6 32 59 4 14 11 11 8 14 21 5 2 27 10 19 26 6

%ile 94 96 87 97 94 85 76 97 93 95 94 96 92 86 94 97 78 91 86 81 95

List of identifiers associated with Fold 4.012.

d1aa8a2 d1aa8b2 d1an9a2 d1an9b2 d1bkw_2 d1coy_2 d1daoa2 d1daob2 d1daoc2 d1daod2
d1daoe2 d1daof2 d1daog2 d1daoh2 d1ddoa2 d1ddob2 d1ddoc2 d1ddod2 d1ddoe2 d1ddof2
d1ddog2 d1ddoh2 d1dob_2 d1doc_2 d1dod_2 d1doe_2 d1foha4 d1fohb4 d1fohc4 d1fohd4
d1gal_2 d1gnd_2 d1ius_2 d1iut_2 d1iuu_2 d1iuv_2 d1iuw_2 d1iux_2 d1kifa2 d1kifb2
d1kifc2 d1kifd2 d1kife2 d1kiff2 d1kifg2 d1kifh2 d1pbb_2 d1pbc_2 d1pbd_2 d1pbe_2
d1pbf_2 d1pdh_2 d1phh_2 d1pxa_2 d1pxb_2 d1pxc_2 d2phh_2 d3cox_2

Scop information.
RCSB PDB information.

fold_occurrences,400,13,96,#fde3e3,34,4,97,#fde3e3,9,14,88,#fde8e3,13,10,92,#fde5e3,18,7,93,#fde5e3,21,24,89,#fde8e3,28,52,79,#fdeee3,26,5,96,#fde3e3,20,12,94,#fde5e3,38,7,97,#fde3e3,31,8,96,#fde3e3,42,10,95,#fde5e3,11,16,91,#fde5e3,6,14,90,#fde8e3,7,6,93,#fde5e3,8,5,94,#fde5e3,4,18,85,#fdebe3,6,9,92,#fde5e3,5,13,90,#fde8e3,4,19,86,#fde8e3,9,4,96,#fde3e3,fold_alignmnents,152,19,91,#fde5e3,10.26,36,83,#fde5e3,2.93,27,88,#fde5e3,20.47,146,32,#fdfce3,4.36e-02,26,88,#fde5e3,7.70e-01,83,62,#fdeee3,152,12,96,#fdeee3,10.26,35,87,#ecfde3,2.93,29,89,#f3fde3,20.47,154,44,#e3fdfa,4.36e-02,27,90,#f7fde3,7.70e-01,56,79,#e3fdfa,55,15,74,#fde5e3,9.66,36,37,#fde8e3,1.76,45,21,#fdebe3,27.11,120,-111,#fafde3,1.55e-05,46,19,#fdebe3,3.82e-01,39,32,#fde8e3,0,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,.,57,0,#eff6f3,87,7,88,#e3fdfa,9.18,15,87,#e3fdfa,2.87,8,93,#e3fdfa,15.61,68,42,#e3fdfa,2.57e-03,11,91,#e3fdfa,1,1,99,#e3fdfa,55,15,87,#e3fdfa,9.66,36,-3500,#e3fdfa,1.76,45,-4400,#e3fdfa,27.11,120,-11900,#e3fdfa,1.55e-05,46,-4500,#e3fdfa,,0,100,#fde3e3,expression_abs,0.9,21,90,#fde8e3,0.8,30,86,#fde8e3,-0.2,85,60,#fdfce3,0.6,40,81,#fdebe3,-0.2,89,59,#fafde3,1.0,26,88,#fde8e3,0.2,69,68,#fdf7e3,0.7,28,87,#fde8e3,-0.3,101,53,#f7fde3,0.9,28,87,#fde8e3,-,67,69,#edf6f3,0.9,28,87,#fde8e3,-,71,67,#edf6f3,0.9,25,88,#fde8e3,-,74,65,#edf6f3,0.8,29,86,#fde8e3,-0.1,80,63,#fdfce3,expression_ratio,0.12,105,66,#f7fde3,0.53,37,88,#fdebe3,0.31,29,90,#fde8e3,0.27,64,79,#fdf4e3,0.31,78,75,#fdfce3,0.21,66,78,#fdf7e3,0.40,53,83,#fdeee3,0.36,84,73,#fdfce3,1.13,70,77,#fdf7e3,miscellaneous,192,152,64,#fdfce3,2.083,18,94,#fde5e3,0.177,5,96,#fde3e3,0.047,16,87,#fde8e3,0.224,3,97,#fde3e3,0.094,6,94,#fde5e3,0.109,32,85,#fdebe3,0.146,59,76,#fdeee3,0.135,4,97,#fde3e3,0.104,14,93,#fde5e3,0.203,11,95,#fde5e3,0.161,11,94,#fde5e3,0.219,8,96,#fde5e3,0.057,14,92,#fde5e3,0.031,21,86,#fde8e3,0.036,5,94,#fde5e3,0.188,2,97,#fde3e3,0.021,27,78,#fdeee3,0.036,10,91,#fde5e3,0.026,19,86,#fdebe3,0.021,26,81,#fdeee3,0.047,6,95,#fde5e3,87,354,16,#e3fdea