|   | value | rank | % |
J(pdba,intra) | number of putative hinges found in fold [Max.] | 6 | 1 |
99.0 |
G(mjan) | fold occurrence in Aful | 34 | 4 |
98.8 |
N(all) | fold occurrence in Rpro | 9 | 4 |
98.8 |
G(syne) | fold occurrence in Aaeo | 26 | 5 |
98.5 |
G(bbur) | fold occurrence in Mpne | 8 | 5 |
98.5 |
B(Glu,pdb100) | interaction with alpha-beta proteins [pdb] | 7 | 4 |
98.5 |
G(mpne) | fold occurrence in Mgen | 7 | 6 |
98.2 |
I(scerb,all) | number of putative hinges found in fold [Ave.] | 3.86 | 2 |
98.0 |
G(scer) | fold occurrence in Phor | 18 | 7 |
97.9 |
G(bsub) | fold occurrence in Ecol | 38 | 7 |
97.9 |
G(mtub) | fold occurrence in Bsub | 31 | 8 |
97.6 |
G(ctra) | fold occurrence in Tpal | 6 | 9 |
97.4 |
B(Tyr,pdb40) | interaction with alpha-beta proteins on same chains [pdb] | 6 | 4 |
97.2 |
G(phor) | fold occurrence in Mthe | 13 | 10 |
97.1 |
G(hinf) | fold occurrence in Mtub | 42 | 10 |
97.1 |
G(ecol) | fold occurrence in Syne | 20 | 12 |
96.5 |
G(cpne) | fold occurrence in Ctra | 5 | 13 |
96.2 |
J(pdbab,inter) | maximal Ca atom displacement between structures[Max.] | 82.35 | 4 |
96.0 |
G(mthe) | fold occurrence in Mjan | 9 | 14 |
95.9 |
G(mgen) | fold occurrence in Hpyl | 6 | 14 |
95.9 |
G(hpyl) | fold occurrence in Hinf | 11 | 16 |
95.3 |
A(nhinges,auto) | sensitivity of transposon at condition YPGly | 2.75 | 4 |
95.2 |
I(scerall,all) | maximal Ca atom displacement between structures[Ave.] | 66.62 | 5 |
95.0 |
I(scera,all) | overall RMS between structures [Ave.] | 28.11 | 5 |
95.0 |
G(tpal) | fold occurrence in Bbur | 4 | 18 |
94.7 |
G(rpro) | fold occurrence in Cpne | 4 | 19 |
94.4 |
B(Ser,pdb40) | interaction with alpha-beta proteins on different chains [pdb] | 2 | 15 |
94.4 |
B(Ala,pdb100) | interaction types [pdb] | 7 | 15 |
94.4 |
J(pdbb,inter) | number of residues [Ave.] | 506.43 | 7 |
93.1 |
J(pdball,intra) | overall RMS between structures [Max.] | 30.89 | 7 |
93.1 |
G(cele) | fold occurrence in Scer | 21 | 24 |
92.9 |
J(scerall,inter) | sensitivity of transposon at condition CyhR | 0.51 | 6 |
92.8 |
B(Thr,pdb40) | interaction on same chains [pdb] | 6 | 11 |
92.2 |
J(scera,inter) | sensitivity of transposon at condition 67Calc | 0.00 | 7 |
91.6 |
I(pdbab,inter) | interaction with alpha-beta proteins on same chains [pdb] | 31 | 28 |
91.2 |
U(all) | pair number | 152 | 19 |
91.2 |
B(His,pdb40) | composition percentage of Gly for pdb40d | 10.4 | 38 |
90.7 |
L(ref) | fold percentage in reference genome | 0.9 | 21 |
90.2 |
I(scerab,all) | degree of rotation angle about hinge [Ave.] | 150.24 | 10 |
90.1 |
E(gal) | fold percentage in galactose | 0.9 | 25 |
88.4 |
J(pdbb,intra) | degree of rotation angle about hinge [Max.] | 174.31 | 12 |
88.1 |
J(pdba,all) | number of residues [Max.] | 664 | 12 |
88.1 |
Q(all) | P-value (str.) | 4.36E-02 | 26 |
88.0 |
E(vegyou) | fold percentage in wild type (H) | 1.0 | 26 |
87.7 |
S(all) | trimmed RMS | 2.93 | 27 |
87.5 |
I(pdball,inter) | interaction on same chains [pdb] | 31 | 40 |
87.5 |
B(Asn,pdb100) | interaction with alpha-beta proteins on same chains [yeast] | 2 | 11 |
87.1 |
E(matea) | fold percentage in mating type a | 0.9 | 28 |
87.0 |
E(mateal) | fold percentage in mating type alpha | 0.9 | 28 |
87.0 |
E(heat) | fold percentage in heat shock | 0.8 | 29 |
86.5 |
E(ref) | fold percentage in reference transcriptome | 0.8 | 30 |
86.0 |
G(aaeo) | fold occurrence in Cele | 28 | 52 |
84.7 |
J(pdbab,intra) | energy difference between start and end states [Max.] | 265478.00 | 16 |
84.2 |
I(pdbab,intra) | interaction with alpha-beta proteins [pdb] | 32 | 51 |
84.0 |
E(sage) | fold percentage in SAGE | 0.7 | 28 |
84.0 |
B(Ser,pdb100) | interaction with alpha-beta proteins [yeast] | 2 | 17 |
84.0 |
I(pdba,inter) | interaction on different chains [pdb] | 2 | 43 |
84.0 |
R(all) | untrimmed RMS | 10.26 | 36 |
83.3 |
J(pdball,inter) | energy difference between start and end states [Ave.] | 131462.23 | 17 |
83.2 |
J(scerab,intra) | sensitivity of transposon at condition 20Ben | 0.00 | 14 |
83.1 |
B(His,pdb100) | composition percentage of Gly for pdb100d | 9.9 | 72 |
82.9 |
I(pdbb,inter) | interaction with beta proteins on same chains [pdb] | 0 | 57 |
82.1 |
B(His,pdb100) | interaction with beta proteins on different chains [yeast] | 0 | 7 |
82.1 |
J(pdbab,all) | sensitivity of transposon at condition HHIG | 0.48 | 15 |
81.9 |
J(scerall,intra) | sensitivity of transposon at condition 01MMS | 0.00 | 15 |
81.9 |
E(vegsam) | fold percentage in wild type (J) | 0.6 | 40 |
81.2 |
I(pdba,inter) | interaction with alpha proteins on same chains [pdb] | 0 | 60 |
81.2 |
J(pdba,inter) | maximum energy difference [Ave.] | 174081.80 | 19 |
81.2 |
J(pdball,all) | maximum energy difference [Max.] | 265478.00 | 19 |
81.2 |
B(Trp,pdb40) | composition percentage of Val for pdb40d | 8.6 | 77 |
81.1 |
B(Trp,pdb100) | interaction with beta proteins on different chains [pdb] | 0 | 65 |
79.6 |
B(Lys,pdb100) | interaction on same chains [yeast] | 2 | 18 |
78.8 |
B(Trp,pdb100) | composition percentage of Val for pdb100d | 8.3 | 93 |
77.9 |
F(cdc15) | fluctuation of expression levels in CDC28 | 0.31 | 29 |
77.0 |
B(Val,pdb100) | interaction with alpha proteins on different chains [pdb] | 0 | 75 |
76.5 |
B(Arg,pdb100) | interaction with beta proteins [yeast] | 0 | 25 |
76.4 |
B(Leu,pdb100) | interaction with alpha proteins on same chains [yeast] | 0 | 21 |
75.3 |
B(Met,pdb100) | interaction with beta proteins on same chains [yeast] | 0 | 21 |
75.3 |
J(pdbb,all) | sensitivity of transposon at condition 9NaCl | 0.00 | 21 |
74.7 |
J(scera,intra) | sensitivity of transposon at condition 2EGTA | 0.00 | 21 |
74.7 |
A(kappa,auto) | sensitivity of transposon at condition CyhS | 0.23 | 21 |
74.7 |
U(foldonly) | pair number (Domain exclusive) | 0 | 57 |
73.6 |
B(Pro,pdb100) | interaction types [yeast] | 2 | 28 |
73.6 |
F(heatec) | fluctuation of expression levels in sporulation | 0.4 | 53 |
72.0 |
B(Ile,pdb100) | interaction with alpha-beta proteins on different chains [yeast] | 1 | 11 |
71.8 |
I(pdball,intra) | interaction types [pdb] | 32 | 90 |
71.8 |
C(sage) | level SAGE | 3.2 | 61 |
71.6 |
I(pdbb,inter) | interaction with alpha proteins on different chains [pdb] | 0 | 77 |
71.3 |
C(mateal) | level mating type alpha | 0.5 | 62 |
71.2 |
J(scerb,inter) | sensitivity of transposon at condition YPD11C | 0.00 | 24 |
71.1 |
I(pdbb,intra) | interaction with beta proteins [pdb] | 0 | 93 |
70.8 |
I(pdbab,inter) | interaction with beta proteins on different chains [pdb] | 0 | 80 |
70.1 |
J(scerab,inter) | sensitivity of transposon at condition 75mMHU | 0.00 | 25 |
69.9 |
J(scerall,all) | sensitivity of transposon at condition MethBl | 0.00 | 25 |
69.9 |
C(matea) | level mating type a | 0.5 | 67 |
68.8 |
L(gal) | fold enrichment in mating type a | -0.0 | 67 |
68.8 |
F(alpha) | fluctuation of expression levels in CDC15 | 0.27 | 64 |
68.5 |
B(Cys,pdb100) | composition percentage of Ala for pdb100d | 9.6 | 134 |
68.1 |
X(size) | fluctuation of expression levels in development (worm) | 1.13 | 69 |
68.1 |
B(Gln,pdb100) | interaction with alpha proteins [yeast] | 0 | 34 |
67.9 |
J(scerb,intra) | sensitivity of transposon at condition YPD37C | 0.00 | 27 |
67.5 |
A(deltae,auto) | sensitivity of transposon at condition 8Caff | 0.00 | 27 |
67.5 |
L(sage) | fold enrichment in wild type (H) | 0.2 | 69 |
67.5 |
F(spor) | fluctuation of expression levels in diauxic shift | 0.21 | 66 |
67.3 |
I(pdba,intra) | interaction with alpha proteins [pdb] | 0 | 105 |
67.1 |
L(gal) | fold enrichment in mating type alpha | 0.0 | 71 |
67.0 |
C(gal) | level galactose | 0.5 | 73 |
66.0 |
B(Lys,pdb100) | composition percentage of Ile for pdb100d | 6.0 | 143 |
66.0 |
L(heat) | fold enrichment in galactose | 0.0 | 74 |
65.6 |
B(Ile,pdb100) | composition percentage of His for pdb100d | 2.5 | 145 |
65.5 |
B(Trp,pdb40) | interaction with beta proteins on same chains [pdb] | 0 | 49 |
65.2 |
L(matea) | fold enrichment in SAGE | -0.3 | 61 |
65.1 |
B(Asp,pdb100) | interaction with beta proteins [pdb] | 0 | 94 |
64.9 |
B(Val,pdb40) | composition percentage of Thr for pdb40d | 5.9 | 144 |
64.7 |
X(age) | average length of fold | 192 | 152 |
63.8 |
C(vegyou) | level wild type (H) | 3.8 | 78 |
63.7 |
B(Ser,pdb100) | composition percentage of Arg for pdb100d | 5.5 | 155 |
63.1 |
F(cdc28) | fold enrichment in heat shock | -0.1 | 80 |
62.8 |
B(Cys,pdb100) | interaction with alpha proteins [pdb] | 0 | 100 |
62.7 |
B(Val,pdb40) | interaction with alpha proteins on same chains [pdb] | 0 | 53 |
62.4 |
C(heat) | level heat shock | 0.5 | 81 |
62.3 |
B(Cys,pdb40) | composition percentage of Ala for pdb40d | 9.0 | 156 |
61.8 |
N(foldonly) | P-value (seq.) | 7.70E-01 | 83 |
61.6 |
L(vegsam) | fold enrichment in reference transcriptome | -0.2 | 85 |
60.5 |
F(diaux) | fluctuation of expression levels in alpha | 0.31 | 78 |
59.6 |
B(Tyr,pdb100) | interaction with alpha-beta proteins on different chains [pdb] | 1 | 129 |
59.6 |
C(ref) | level transcriptome | 3.4 | 87 |
59.5 |
L(vegyou) | fold enrichment in wild type (J) | -0.2 | 87 |
59.2 |
J(scerb,all) | sensitivity of transposon at condition 10Ben | 0.19 | 34 |
59.0 |
B(Asn,pdb40) | composition percentage of Met for pdb40d | 2.3 | 168 |
58.8 |
B(Ala,pdb100) | composition percentage of Tyr for pdb40d | 3.5 | 168 |
58.8 |
B(Glu,pdb40) | composition percentage of Asp for pdb40d | 6.0 | 170 |
58.3 |
B(Phe,pdb100) | composition percentage of Glu for pdb100d | 7.0 | 176 |
58.1 |
B(Ile,pdb40) | composition percentage of His for pdb40d | 2.3 | 171 |
58.1 |
C(vegsam) | level wild type (J) | 2.3 | 91 |
57.7 |
B(Val,pdb100) | composition percentage of Thr for pdb100d | 5.7 | 179 |
57.4 |
B(Met,pdb100) | composition percentage of Leu for pdb100d | 8.7 | 180 |
57.1 |
B(Lys,pdb40) | composition percentage of Ile for pdb40d | 5.6 | 175 |
57.1 |
B(Phe,pdb100) | interaction on different chains [yeast] | 1 | 17 |
56.4 |
F(deve) | fluctuation of expression levels in heat shock (E.coli) | 0.36 | 84 |
55.6 |
J(scera,all) | sensitivity of transposon at condition BCIP | 0.00 | 37 |
55.4 |
B(Asn,pdb100) | composition percentage of Met for pdb100d | 2.1 | 190 |
54.8 |
B(Gly,pdb100) | interaction with alpha proteins on different chains [yeast] | 0 | 18 |
53.8 |
B(Asp,pdb100) | composition percentage of Cys for pdb100d | 1.2 | 194 |
53.8 |
B(Glu,pdb100) | composition percentage of Asp for pdb100d | 5.7 | 197 |
53.1 |
I(pdball,inter) | composition percentage of Tyr for pdb100d | 3.3 | 198 |
52.9 |
B(Met,pdb40) | composition percentage of Leu for pdb40d | 8.4 | 205 |
49.8 |
A(rmsoverall,auto) | sensitivity of transposon at condition 12Calc | 0.00 | 42 |
49.4 |
B(Ser,pdb40) | composition percentage of Arg for pdb40d | 4.8 | 211 |
48.3 |
A(maxcadev,auto) | sensitivity of transposon at condition 46Hygr | 0.37 | 43 |
48.2 |
B(Asp,pdb40) | composition percentage of Cys for pdb40d | 1.1 | 214 |
47.5 |
B(Pro,pdb40) | composition percentage of Asn for pdb40d | 3.9 | 220 |
46.1 |
B(Phe,pdb40) | composition percentage of Glu for pdb40d | 6.5 | 231 |
43.4 |
B(Leu,pdb40) | composition percentage of Lys for pdb40d | 5.7 | 231 |
43.4 |
B(Thr,pdb40) | composition percentage of Ser for pdb40d | 5.3 | 234 |
42.6 |
B(Pro,pdb100) | composition percentage of Asn for pdb100d | 3.8 | 256 |
39.0 |
B(Tyr,pdb100) | composition percentage of Trp for pdb100d | 0.9 | 256 |
39.0 |
B(Thr,pdb100) | composition percentage of Ser for pdb100d | 5.0 | 266 |
36.7 |
B(Gln,pdb40) | composition percentage of Pro for pdb40d | 4.0 | 259 |
36.5 |
J(scerab,all) | sensitivity of transposon at condition 003SDS | 0.16 | 53 |
36.1 |
B(Tyr,pdb40) | composition percentage of Trp for pdb40d | 0.9 | 261 |
36.0 |
B(Leu,pdb100) | composition percentage of Lys for pdb100d | 5.4 | 274 |
34.8 |
X(func) | pseudogene complement of the ribbon worm | 1 | 46 |
34.3 |
B(Gly,pdb100) | composition percentage of Phe for pdb100d | 2.9 | 277 |
34.0 |
B(Gly,pdb40) | composition percentage of Phe for pdb40d | 3.0 | 274 |
32.8 |
P(all) | seq. identity | 20.47 | 146 |
32.4 |
B(Gln,pdb100) | composition percentage of Pro for pdb100d | 3.6 | 298 |
29.0 |
B(Arg,pdb40) | composition percentage of Gln for pdb40d | 2.9 | 290 |
28.9 |
B(Thr,pdb100) | interaction on different chains [pdb] | 1 | 232 |
27.3 |
B(Arg,pdb100) | composition percentage of Gln for pdb100d | 2.8 | 308 |
26.7 |
X(pseu) | year of fold determined | 87 | 354 |
15.7 |