YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Rank report of 1osj

The top-five ranked attributes
 I(pdbb,all)
interaction with beta proteins on different chains [yeast]
C(sage)
level SAGE
L(matea)
fold enrichment in SAGE
X(age)
average length of fold
J(scera,inter)
sensitivity of transposon at condition 67Calc
value020.83.83810.00
rank41010317
%97.095.394.392.691.6


The bottom-five ranked attributes
 J(pdball,all)
maximum energy difference [Max.]
B(Arg,pdb40)
composition percentage of Gln for pdb40d
Q(all)
P-value (str.)
I(scerb,all)
number of putative hinges found in fold [Ave.]
J(pdba,intra)
number of putative hinges found in fold [Max.]
value3871.501.74.76E-270.000
rank91381205100100
% 9.9 6.6 5.1 1.0 1.0


All attributes
  valuerank%
I(pdbb,all)interaction with beta proteins on different chains [yeast]04 97.0
C(sage)level SAGE20.810 95.3
L(matea)fold enrichment in SAGE3.810 94.3
X(age)average length of fold38131 92.6
J(scera,inter)sensitivity of transposon at condition 67Calc0.007 91.6
E(sage)fold percentage in SAGE1.417 90.3
I(pdba,all)interaction with alpha proteins on different chains [yeast]013 90.2
F(spor)fluctuation of expression levels in diauxic shift0.2922 89.1
J(scerall,inter)sensitivity of transposon at condition CyhR0.0010 88.0
L(heat)fold enrichment in galactose1.528 87.0
G(mthe)fold occurrence in Mjan245 86.8
B(His,pdb40)composition percentage of Gly for pdb40d10.055 86.5
C(gal)level galactose1.229 86.5
P(all)seq. identity45.7631 85.6
I(pdbab,all)interaction with alpha-beta proteins on different chains [yeast]119 85.6
B(Ser,pdb40)interaction with alpha-beta proteins on different chains [pdb]140 85.1
G(phor)fold occurrence in Mthe252 84.7
F(heatec)fluctuation of expression levels in sporulation0.5529 84.7
E(gal)fold percentage in galactose0.733 84.7
B(Phe,pdb40)composition percentage of Glu for pdb40d8.963 84.6
B(Tyr,pdb100)interaction with alpha-beta proteins on different chains [pdb]1053 83.4
I(scerb,inter)interaction with beta proteins on same chains [yeast]022 83.3
J(scerab,intra)sensitivity of transposon at condition 20Ben0.0014 83.1
B(Phe,pdb100)composition percentage of Glu for pdb100d8.673 82.6
G(mjan)fold occurrence in Aful260 82.4
I(pdbb,inter)interaction with beta proteins on same chains [pdb]057 82.1
G(cele)fold occurrence in Scer761 82.1
B(His,pdb100)interaction with beta proteins on different chains [yeast]07 82.1
J(scerall,intra)sensitivity of transposon at condition 01MMS0.0015 81.9
I(scera,inter)interaction with alpha proteins on same chains [yeast]024 81.8
N(all)fold occurrence in Rpro163 81.5
I(pdba,inter)interaction with alpha proteins on same chains [pdb]060 81.2
I(pdball,all)interaction on different chains [yeast]125 81.1
I(scerb,intra)interaction with beta proteins [yeast]025 81.1
B(His,pdb100)composition percentage of Gly for pdb100d9.780 81.0
G(syne)fold occurrence in Aaeo266 80.6
B(Trp,pdb100)interaction with beta proteins on different chains [pdb]065 79.6
B(Trp,pdb40)composition percentage of Val for pdb40d8.586 78.9
G(scer)fold occurrence in Phor172 78.8
B(Gln,pdb40)composition percentage of Pro for pdb40d5.989 78.2
B(Cys,pdb100)composition percentage of Ala for pdb100d10.692 78.1
B(Lys,pdb100)composition percentage of Ile for pdb100d6.693 77.9
C(matea)level mating type a0.748 77.7
E(matea)fold percentage in mating type a0.449 77.2
B(Cys,pdb40)composition percentage of Ala for pdb40d10.693 77.2
L(gal)fold enrichment in mating type a0.350 76.7
E(heat)fold percentage in heat shock0.450 76.7
B(Val,pdb100)interaction with alpha proteins on different chains [pdb]075 76.5
G(mgen)fold occurrence in Hpyl180 76.5
B(Arg,pdb100)interaction with beta proteins [yeast]025 76.4
F(alpha)fluctuation of expression levels in CDC150.2948 76.4
C(heat)level heat shock0.851 76.3
F(cdc28)fold enrichment in heat shock0.451 76.3
B(Asn,pdb100)composition percentage of Met for pdb100d2.7102 75.7
B(Trp,pdb100)composition percentage of Val for pdb100d8.2102 75.7
J(pdbb,all)sensitivity of transposon at condition 9NaCl0.0021 74.7
J(scera,intra)sensitivity of transposon at condition 2EGTA0.0021 74.7
E(mateal)fold percentage in mating type alpha0.355 74.4
B(Gln,pdb100)composition percentage of Pro for pdb100d5.7108 74.3
B(Lys,pdb40)composition percentage of Ile for pdb40d6.3105 74.3
I(scera,intra)interaction with alpha proteins [yeast]034 74.2
B(Ala,pdb40)number of enzymatic functions associated with the fold132 74.0
X(enz)total number of functions associated with the fold155 73.9
E(vegsam)fold percentage in wild type (J)0.356 73.7
U(foldonly)pair number (Domain exclusive)057 73.6
B(Glu,pdb100)interaction with alpha-beta proteins [pdb]171 73.5
G(ecol)fold occurrence in Syne291 73.2
G(hinf)fold occurrence in Mtub292 72.9
L(ref)fold percentage in reference genome0.359 72.6
G(bsub)fold occurrence in Ecol394 72.4
G(mtub)fold occurrence in Bsub394 72.4
B(Ile,pdb100)interaction with alpha-beta proteins on different chains [yeast]111 71.8
G(mpne)fold occurrence in Mgen096 71.8
I(pdbb,inter)interaction with alpha proteins on different chains [pdb]077 71.3
C(mateal)level mating type alpha0.562 71.2
J(scerb,inter)sensitivity of transposon at condition YPD11C0.0024 71.1
I(pdbb,intra)interaction with beta proteins [pdb]093 70.8
L(gal)fold enrichment in mating type alpha0.163 70.7
I(pdbab,inter)interaction with beta proteins on different chains [pdb]080 70.1
G(bbur)fold occurrence in Mpne0102 70.0
J(scerab,inter)sensitivity of transposon at condition 75mMHU0.0025 69.9
J(scerall,all)sensitivity of transposon at condition MethBl0.0025 69.9
B(Ser,pdb100)interaction with alpha-beta proteins [yeast]132 69.8
G(hpyl)fold occurrence in Hinf1104 69.4
J(pdbb,inter)number of residues [Ave.]358.0031 69.3
E(ref)fold percentage in reference transcriptome0.266 69.3
A(rmsoverall,auto)sensitivity of transposon at condition 12Calc0.4926 68.7
A(kappa,auto)sensitivity of transposon at condition CyhS0.0026 68.7
I(pdbab,intra)interaction with alpha-beta proteins [pdb]10102 68.0
B(Gln,pdb100)interaction with alpha proteins [yeast]034 67.9
J(pdbab,all)sensitivity of transposon at condition HHIG0.0027 67.5
J(scerb,intra)sensitivity of transposon at condition YPD37C0.0027 67.5
A(deltae,auto)sensitivity of transposon at condition 8Caff0.0027 67.5
B(Asn,pdb40)composition percentage of Met for pdb40d2.5133 67.4
I(pdba,intra)interaction with alpha proteins [pdb]0105 67.1
G(aaeo)fold occurrence in Cele6114 66.5
C(vegsam)level wild type (J)2.974 65.6
B(Met,pdb100)composition percentage of Leu for pdb100d9.1145 65.5
L(vegyou)fold enrichment in wild type (J)-0.174 65.3
B(Met,pdb40)composition percentage of Leu for pdb40d9.1143 65.0
B(Asp,pdb100)interaction with beta proteins [pdb]094 64.9
B(Thr,pdb100)interaction on different chains [pdb]10113 64.6
I(pdba,inter)interaction on different chains [pdb]197 63.8
E(vegyou)fold percentage in wild type (H)0.277 63.7
G(ctra)fold occurrence in Tpal0124 63.5
B(Cys,pdb100)interaction with alpha proteins [pdb]0100 62.7
G(tpal)fold occurrence in Bbur0127 62.6
J(pdba,all)number of residues [Max.]35839 61.4
G(cpne)fold occurrence in Ctra0135 60.3
A(nhinges,auto)sensitivity of transposon at condition YPGly0.0033 60.2
G(rpro)fold occurrence in Cpne0137 59.7
F(deve)fluctuation of expression levels in heat shock (E.coli)0.3977 59.3
B(Ser,pdb40)composition percentage of Arg for pdb40d5.3167 59.1
U(all)pair number1089 58.8
B(Ser,pdb100)composition percentage of Arg for pdb100d5.2176 58.1
I(pdbab,inter)interaction with alpha-beta proteins on same chains [pdb]0137 57.1
B(Phe,pdb100)interaction on different chains [yeast]117 56.4
C(ref)level transcriptome3.095 55.8
L(vegsam)fold enrichment in reference transcriptome-0.395 55.8
J(scera,all)sensitivity of transposon at condition BCIP0.0037 55.4
L(sage)fold enrichment in wild type (H)-0.195 55.2
B(Pro,pdb100)interaction types [yeast]148 54.7
B(Leu,pdb40)composition percentage of Lys for pdb40d6.2185 54.7
C(vegyou)level wild type (H)2.998 54.4
B(Gly,pdb100)interaction with alpha proteins on different chains [yeast]018 53.8
B(Tyr,pdb100)composition percentage of Trp for pdb100d1.2197 53.1
J(scerb,all)sensitivity of transposon at condition 10Ben0.0040 51.8
F(diaux)fluctuation of expression levels in alpha0.2996 50.3
B(Glu,pdb100)composition percentage of Asp for pdb100d5.6209 50.2
B(Tyr,pdb40)composition percentage of Trp for pdb40d1.2204 50.0
B(Leu,pdb100)composition percentage of Lys for pdb100d6.1213 49.3
B(Ala,pdb100)interaction types [pdb]1140 47.8
F(cdc15)fluctuation of expression levels in CDC280.2268 46.0
I(pdball,intra)interaction types [pdb]10174 45.5
I(scerab,intra)interaction with alpha-beta proteins [yeast]172 45.5
B(Glu,pdb40)composition percentage of Asp for pdb40d5.3241 40.9
B(Gly,pdb40)composition percentage of Phe for pdb40d3.2251 38.5
B(Gly,pdb100)composition percentage of Phe for pdb100d3.0265 36.9
I(pdball,inter)interaction on same chains [pdb]0202 36.7
B(Asp,pdb100)composition percentage of Cys for pdb100d0.8270 35.7
I(scerab,inter)interaction with alpha-beta proteins on same chains [yeast]086 34.8
I(scerab,all)degree of rotation angle about hinge [Ave.]18.8266 34.7
B(Asp,pdb40)composition percentage of Cys for pdb40d0.8269 34.1
I(pdball,inter)composition percentage of Tyr for pdb100d2.7277 34.0
J(scerab,all)sensitivity of transposon at condition 003SDS0.0055 33.7
B(Ala,pdb100)composition percentage of Tyr for pdb40d2.6277 32.1
J(pdbb,intra)degree of rotation angle about hinge [Max.]18.8269 31.7
R(all)untrimmed RMS4.18149 31.0
A(maxcadev,auto)sensitivity of transposon at condition 46Hygr0.0058 30.1
S(all)trimmed RMS0.85154 28.7
I(scerall,intra)interaction types [yeast]195 28.0
I(scerall,all)maximal Ca atom displacement between structures[Ave.]21.3875 25.7
B(Ile,pdb100)composition percentage of His for pdb100d1.4317 24.5
B(Ile,pdb40)composition percentage of His for pdb40d1.4310 24.0
J(pdbab,inter)maximal Ca atom displacement between structures[Max.]21.3878 22.8
B(Val,pdb40)composition percentage of Thr for pdb40d4.1320 21.6
X(pseu)year of fold determined89332 21.0
B(Val,pdb100)composition percentage of Thr for pdb100d4.1340 19.0
I(scera,all)overall RMS between structures [Ave.]4.8882 18.8
B(Pro,pdb100)composition percentage of Asn for pdb100d2.9344 18.1
B(Thr,pdb40)composition percentage of Ser for pdb40d3.8344 15.7
B(Thr,pdb100)composition percentage of Ser for pdb100d3.8355 15.5
B(Pro,pdb40)composition percentage of Asn for pdb40d2.6345 15.4
I(scerall,inter)interaction on same chains [yeast]0112 15.2
J(pdball,intra)overall RMS between structures [Max.]4.8886 14.9
N(foldonly)P-value (seq.)1.09E-18185 14.4
X(size)fluctuation of expression levels in development (worm)0.56190 12.0
J(pdball,inter)energy difference between start and end states [Ave.]1851.8090 10.9
J(pdba,inter)maximum energy difference [Ave.]3871.5090 10.9
J(pdbab,intra)energy difference between start and end states [Max.]1851.8090 10.9
B(Arg,pdb100)composition percentage of Gln for pdb100d2.0376 10.5
J(pdball,all)maximum energy difference [Max.]3871.5091 9.9
B(Arg,pdb40)composition percentage of Gln for pdb40d1.7381 6.6
Q(all)P-value (str.)4.76E-27205 5.1
I(scerb,all)number of putative hinges found in fold [Ave.]0.00100 1.0
J(pdba,intra)number of putative hinges found in fold [Max.]0100 1.0