YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Rank report of 1hho

The top-five ranked attributes
 B(Thr,pdb100)
interaction on different chains [pdb]
B(Val,pdb100)
interaction with alpha proteins on different chains [pdb]
I(pdba,intra)
interaction with alpha proteins [pdb]
I(pdball,intra)
interaction types [pdb]
B(Ile,pdb100)
composition percentage of His for pdb100d
value4954944944975.8
rank11138
%99.799.799.799.198.1


The bottom-five ranked attributes
 B(Arg,pdb100)
composition percentage of Gln for pdb100d
I(scerall,all)
maximal Ca atom displacement between structures[Ave.]
B(Lys,pdb100)
composition percentage of Ile for pdb100d
B(Ser,pdb100)
composition percentage of Arg for pdb100d
X(pseu)
year of fold determined
value2.417.382.82.473
rank35386378387419
%16.014.910.0 7.9 0.2


All attributes
  valuerank%
B(Thr,pdb100)interaction on different chains [pdb]4951 99.7
B(Val,pdb100)interaction with alpha proteins on different chains [pdb]4941 99.7
I(pdba,intra)interaction with alpha proteins [pdb]4941 99.7
I(pdball,intra)interaction types [pdb]4973 99.1
B(Ile,pdb100)composition percentage of His for pdb100d5.88 98.1
I(pdbb,all)interaction with beta proteins on different chains [yeast]04 97.0
B(Cys,pdb40)composition percentage of Ala for pdb40d14.318 95.6
I(pdbb,inter)interaction with alpha proteins on different chains [pdb]116 94.0
B(Arg,pdb100)interaction with beta proteins [yeast]17 93.4
B(Met,pdb100)interaction with beta proteins on same chains [yeast]16 92.9
F(spor)fluctuation of expression levels in diauxic shift0.3515 92.6
J(pdba,intra)number of putative hinges found in fold [Max.]39 91.1
B(Cys,pdb100)composition percentage of Ala for pdb100d12.340 90.5
G(ecol)fold occurrence in Syne833 90.3
I(pdba,all)interaction with alpha proteins on different chains [yeast]013 90.2
B(Cys,pdb100)interaction with alpha proteins [pdb]129 89.2
I(scerb,inter)interaction with beta proteins on same chains [yeast]116 87.9
B(Met,pdb100)composition percentage of Leu for pdb100d11.553 87.4
I(scerb,intra)interaction with beta proteins [yeast]117 87.1
I(pdbb,inter)interaction with beta proteins on same chains [pdb]246 85.6
B(Leu,pdb100)composition percentage of Lys for pdb100d9.061 85.5
B(Asp,pdb100)interaction with beta proteins [pdb]139 85.4
B(Ser,pdb40)interaction with alpha-beta proteins on different chains [pdb]140 85.1
X(size)fluctuation of expression levels in development (worm)1.534 84.3
I(pdba,inter)interaction on different chains [pdb]243 84.0
B(Trp,pdb40)interaction with beta proteins on same chains [pdb]123 83.7
B(Gly,pdb100)composition percentage of Phe for pdb100d4.870 83.3
B(Trp,pdb100)composition percentage of Val for pdb100d8.672 82.9
I(scera,inter)interaction with alpha proteins on same chains [yeast]024 81.8
I(pdba,inter)interaction with alpha proteins on same chains [pdb]060 81.2
B(Ala,pdb100)interaction types [pdb]352 80.6
B(Trp,pdb100)interaction with beta proteins on different chains [pdb]065 79.6
G(aaeo)fold occurrence in Cele1770 79.4
I(pdbab,all)interaction with alpha-beta proteins on different chains [yeast]029 78.0
B(Gly,pdb40)composition percentage of Phe for pdb40d4.690 77.9
I(pdbb,intra)interaction with beta proteins [pdb]273 77.1
L(vegyou)fold enrichment in wild type (J)0.551 76.1
B(Leu,pdb100)interaction with alpha proteins on same chains [yeast]021 75.3
C(vegsam)level wild type (J)4.554 74.9
C(gal)level galactose0.755 74.4
I(scera,intra)interaction with alpha proteins [yeast]034 74.2
F(diaux)fluctuation of expression levels in alpha0.3550 74.1
X(enz)total number of functions associated with the fold155 73.9
L(sage)fold enrichment in wild type (H)0.456 73.6
B(Glu,pdb100)interaction with alpha-beta proteins [pdb]171 73.5
L(heat)fold enrichment in galactose0.457 73.5
L(vegsam)fold enrichment in reference transcriptome0.159 72.6
C(vegyou)level wild type (H)4.560 72.1
I(pdball,all)interaction on different chains [yeast]037 72.0
G(mpne)fold occurrence in Mgen096 71.8
I(pdbab,inter)interaction with beta proteins on different chains [pdb]080 70.1
G(bbur)fold occurrence in Mpne0102 70.0
B(Ile,pdb40)composition percentage of His for pdb40d2.7123 69.9
B(Leu,pdb40)composition percentage of Lys for pdb40d7.2123 69.9
C(ref)level transcriptome4.465 69.8
G(syne)fold occurrence in Aaeo1105 69.1
F(heatec)fluctuation of expression levels in sporulation0.3759 68.8
B(Gln,pdb100)interaction with alpha proteins [yeast]034 67.9
J(pdbab,intra)energy difference between start and end states [Max.]90647.3533 67.3
F(deve)fluctuation of expression levels in heat shock (E.coli)0.4662 67.2
B(Asn,pdb40)composition percentage of Met for pdb40d2.4144 64.7
G(scer)fold occurrence in Phor0122 64.1
G(cele)fold occurrence in Scer2124 63.5
G(ctra)fold occurrence in Tpal0124 63.5
L(gal)fold enrichment in mating type alpha-0.279 63.3
G(hinf)fold occurrence in Mtub1125 63.2
B(Thr,pdb40)composition percentage of Ser for pdb40d6.2150 63.2
G(tpal)fold occurrence in Bbur0127 62.6
B(Val,pdb40)interaction with alpha proteins on same chains [pdb]053 62.4
I(scerb,all)number of putative hinges found in fold [Ave.]1.6238 62.4
G(mthe)fold occurrence in Mjan0129 62.1
C(mateal)level mating type alpha0.385 60.5
G(cpne)fold occurrence in Ctra0135 60.3
G(phor)fold occurrence in Mthe0136 60.0
N(all)fold occurrence in Rpro0136 60.0
G(rpro)fold occurrence in Cpne0137 59.7
B(Tyr,pdb100)interaction with alpha-beta proteins on different chains [pdb]1129 59.6
B(Met,pdb40)composition percentage of Leu for pdb40d8.8166 59.3
B(Trp,pdb40)composition percentage of Val for pdb40d7.2169 58.6
F(alpha)fluctuation of expression levels in CDC150.2586 57.6
I(pdbab,inter)interaction with alpha-beta proteins on same chains [pdb]0137 57.1
E(mateal)fold percentage in mating type alpha0.193 56.7
G(mjan)fold occurrence in Aful0148 56.5
E(ref)fold percentage in reference transcriptome0.194 56.3
J(pdball,all)maximum energy difference [Max.]131842.5645 55.4
B(Lys,pdb100)interaction on same chains [yeast]138 55.3
G(mtub)fold occurrence in Bsub1153 55.0
G(mgen)fold occurrence in Hpyl0153 55.0
B(Pro,pdb100)interaction types [yeast]148 54.7
C(sage)level SAGE1.598 54.4
E(gal)fold percentage in galactose0.198 54.4
G(bsub)fold occurrence in Ecol1158 53.5
E(vegsam)fold percentage in wild type (J)0.199 53.5
E(sage)fold percentage in SAGE0.182 53.1
B(Tyr,pdb100)composition percentage of Trp for pdb100d1.2197 53.1
J(pdball,inter)energy difference between start and end states [Ave.]29955.4948 52.5
L(ref)fold percentage in reference genome0.1104 51.6
B(Glu,pdb40)composition percentage of Asp for pdb40d5.7199 51.2
E(vegyou)fold percentage in wild type (H)0.1106 50.0
B(Tyr,pdb40)composition percentage of Trp for pdb40d1.2204 50.0
I(pdball,inter)interaction on same chains [pdb]2161 49.5
X(age)average length of fold147212 49.5
B(His,pdb100)composition percentage of Gly for pdb100d7.2216 48.6
B(Thr,pdb40)interaction on same chains [pdb]173 48.2
B(His,pdb40)composition percentage of Gly for pdb40d7.2214 47.5
J(pdbb,intra)degree of rotation angle about hinge [Max.]49.5953 47.5
J(pdba,inter)maximum energy difference [Ave.]52329.9256 44.6
B(Ala,pdb100)composition percentage of Tyr for pdb40d3.0227 44.4
B(Thr,pdb100)composition percentage of Ser for pdb100d5.3235 44.0
L(matea)fold enrichment in SAGE-0.798 44.0
G(hpyl)fold occurrence in Hinf0191 43.8
B(Lys,pdb40)composition percentage of Ile for pdb40d5.1232 43.1
B(Val,pdb40)composition percentage of Thr for pdb40d5.0239 41.4
I(scerab,all)degree of rotation angle about hinge [Ave.]29.9560 40.6
L(gal)fold enrichment in mating type a-0.5128 40.5
B(Arg,pdb40)composition percentage of Gln for pdb40d3.4245 40.0
I(pdbab,intra)interaction with alpha-beta proteins [pdb]1192 39.8
B(Glu,pdb100)composition percentage of Asp for pdb100d5.1255 39.3
B(Pro,pdb40)composition percentage of Asn for pdb40d3.7253 38.0
I(scerall,inter)interaction on same chains [yeast]182 37.9
C(matea)level mating type a0.2140 34.9
I(scerab,inter)interaction with alpha-beta proteins on same chains [yeast]086 34.8
J(pdball,intra)overall RMS between structures [Max.]10.2466 34.7
B(Gln,pdb100)composition percentage of Pro for pdb100d3.8276 34.3
B(Asp,pdb40)composition percentage of Cys for pdb40d0.8269 34.1
B(Phe,pdb100)composition percentage of Glu for pdb100d5.8280 33.3
B(Asn,pdb100)composition percentage of Met for pdb100d1.5283 32.6
B(Tyr,pdb40)interaction with alpha-beta proteins on same chains [pdb]096 31.9
B(Val,pdb100)composition percentage of Thr for pdb100d4.7287 31.7
E(heat)fold percentage in heat shock0.0147 31.6
B(Asp,pdb100)composition percentage of Cys for pdb100d0.7289 31.2
I(scera,all)overall RMS between structures [Ave.]7.5571 29.7
I(scerall,intra)interaction types [yeast]195 28.0
E(matea)fold percentage in mating type a0.0155 27.9
J(pdbab,inter)maximal Ca atom displacement between structures[Max.]24.8073 27.7
J(pdbb,inter)number of residues [Ave.]147.9574 26.7
J(pdba,all)number of residues [Max.]15777 23.8
B(Phe,pdb40)composition percentage of Glu for pdb40d5.1314 23.0
I(scerab,intra)interaction with alpha-beta proteins [yeast]0102 22.7
B(Ser,pdb100)interaction with alpha-beta proteins [yeast]083 21.7
B(Pro,pdb100)composition percentage of Asn for pdb100d3.1329 21.7
I(pdball,inter)composition percentage of Tyr for pdb100d2.1329 21.7
B(Ser,pdb40)composition percentage of Arg for pdb40d3.5322 21.1
C(heat)level heat shock0.1172 20.0
F(cdc28)fold enrichment in heat shock-0.8172 20.0
B(Gln,pdb40)composition percentage of Pro for pdb40d3.2328 19.6
B(Asn,pdb100)interaction with alpha-beta proteins on same chains [yeast]069 18.8
B(Arg,pdb100)composition percentage of Gln for pdb100d2.4353 16.0
I(scerall,all)maximal Ca atom displacement between structures[Ave.]17.3886 14.9
B(Lys,pdb100)composition percentage of Ile for pdb100d2.8378 10.0
B(Ser,pdb100)composition percentage of Arg for pdb100d2.4387 7.9
X(pseu)year of fold determined73419 0.2