YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Rank report of 1gtm

The top-five ranked attributes
 G(mtub)
fold occurrence in Bsub
G(hinf)
fold occurrence in Mtub
E(gal)
fold percentage in galactose
G(syne)
fold occurrence in Aaeo
G(ecol)
fold occurrence in Syne
value981248.13359
rank11123
%99.799.799.599.499.1


The bottom-five ranked attributes
 B(Phe,pdb40)
composition percentage of Glu for pdb40d
I(scerab,intra)
interaction with alpha-beta proteins [yeast]
B(Phe,pdb100)
composition percentage of Glu for pdb100d
B(Arg,pdb100)
composition percentage of Gln for pdb100d
X(pseu)
year of fold determined
value5.205.02.674
rank309102335337417
%24.322.720.219.8 0.7


All attributes
  valuerank%
G(mtub)fold occurrence in Bsub981 99.7
G(hinf)fold occurrence in Mtub1241 99.7
E(gal)fold percentage in galactose8.11 99.5
G(syne)fold occurrence in Aaeo332 99.4
G(ecol)fold occurrence in Syne593 99.1
G(bsub)fold occurrence in Ecol793 99.1
E(matea)fold percentage in mating type a6.82 99.1
E(mateal)fold percentage in mating type alpha5.92 99.1
E(heat)fold percentage in heat shock6.82 99.1
G(phor)fold occurrence in Mthe264 98.8
G(hpyl)fold occurrence in Hinf254 98.8
G(mgen)fold occurrence in Hpyl214 98.8
G(cpne)fold occurrence in Ctra104 98.8
G(rpro)fold occurrence in Cpne104 98.8
N(all)fold occurrence in Rpro94 98.8
U(all)pair number7523 98.6
X(enz)total number of functions associated with the fold63 98.6
G(scer)fold occurrence in Phor195 98.5
B(Ser,pdb40)interaction with alpha-beta proteins on different chains [pdb]54 98.5
G(mjan)fold occurrence in Aful316 98.2
E(vegsam)fold percentage in wild type (J)5.54 98.1
E(vegyou)fold percentage in wild type (H)4.64 98.1
G(mthe)fold occurrence in Mjan167 97.9
G(bbur)fold occurrence in Mpne58 97.6
B(Ala,pdb40)number of enzymatic functions associated with the fold53 97.6
I(pdba,inter)interaction on different chains [pdb]77 97.4
G(mpne)fold occurrence in Mgen49 97.4
E(ref)fold percentage in reference transcriptome3.66 97.2
G(cele)fold occurrence in Scer7210 97.1
I(pdbb,all)interaction with beta proteins on different chains [yeast]04 97.0
B(Glu,pdb100)interaction with alpha-beta proteins [pdb]59 96.6
G(ctra)fold occurrence in Tpal512 96.5
B(Leu,pdb100)interaction with alpha proteins on same chains [yeast]13 96.5
B(Pro,pdb100)interaction types [yeast]84 96.2
B(Gln,pdb100)interaction with alpha proteins [yeast]24 96.2
G(tpal)fold occurrence in Bbur513 96.2
G(aaeo)fold occurrence in Cele13214 95.9
E(sage)fold percentage in SAGE2.88 95.4
L(ref)fold percentage in reference genome3.110 95.3
B(Lys,pdb100)interaction on same chains [yeast]74 95.3
B(Asn,pdb100)interaction with alpha-beta proteins on same chains [yeast]54 95.3
B(Ser,pdb100)interaction with alpha-beta proteins [yeast]55 95.3
B(Tyr,pdb40)interaction with alpha-beta proteins on same chains [pdb]47 95.0
B(Ala,pdb100)interaction types [pdb]715 94.4
I(pdbb,inter)interaction with alpha proteins on different chains [pdb]116 94.0
B(Arg,pdb100)interaction with beta proteins [yeast]17 93.4
J(pdbb,intra)degree of rotation angle about hinge [Max.]177.057 93.1
B(Met,pdb100)interaction with beta proteins on same chains [yeast]16 92.9
B(Val,pdb40)interaction with alpha proteins on same chains [pdb]110 92.9
I(pdbab,inter)interaction with beta proteins on different chains [pdb]120 92.5
B(Thr,pdb40)interaction on same chains [pdb]611 92.2
J(scera,inter)sensitivity of transposon at condition 67Calc0.007 91.6
J(pdba,intra)number of putative hinges found in fold [Max.]39 91.1
J(pdbab,intra)energy difference between start and end states [Max.]1069579.409 91.1
J(pdball,all)maximum energy difference [Max.]1069579.409 91.1
B(Trp,pdb100)composition percentage of Val for pdb100d9.838 91.0
I(pdba,all)interaction with alpha proteins on different chains [yeast]013 90.2
B(Gly,pdb100)interaction with alpha proteins on different chains [yeast]14 89.7
B(Cys,pdb100)interaction with alpha proteins [pdb]129 89.2
J(pdball,inter)energy difference between start and end states [Ave.]163705.2011 89.1
J(scerall,inter)sensitivity of transposon at condition CyhR0.0010 88.0
I(scerb,inter)interaction with beta proteins on same chains [yeast]116 87.9
B(His,pdb100)composition percentage of Gly for pdb100d10.451 87.9
C(gal)level galactose1.327 87.4
L(heat)fold enrichment in galactose1.627 87.4
I(scerb,intra)interaction with beta proteins [yeast]117 87.1
C(matea)level mating type a1.130 86.0
L(gal)fold enrichment in mating type a1.230 86.0
B(Asp,pdb100)interaction with beta proteins [pdb]139 85.4
C(heat)level heat shock1.333 84.7
F(cdc28)fold enrichment in heat shock1.233 84.7
B(Trp,pdb40)composition percentage of Val for pdb40d8.864 84.3
J(pdba,inter)maximum energy difference [Ave.]206120.0416 84.2
B(His,pdb40)composition percentage of Gly for pdb40d9.866 83.8
B(Trp,pdb40)interaction with beta proteins on same chains [pdb]123 83.7
B(Cys,pdb40)composition percentage of Ala for pdb40d11.167 83.6
C(mateal)level mating type alpha0.936 83.3
J(pdbab,inter)maximal Ca atom displacement between structures[Max.]66.0317 83.2
J(scerab,intra)sensitivity of transposon at condition 20Ben0.0014 83.1
L(gal)fold enrichment in mating type alpha0.937 82.8
I(scerb,all)number of putative hinges found in fold [Ave.]2.1818 82.2
B(His,pdb100)interaction with beta proteins on different chains [yeast]07 82.1
J(scerall,intra)sensitivity of transposon at condition 01MMS0.0015 81.9
I(scera,inter)interaction with alpha proteins on same chains [yeast]024 81.8
L(vegyou)fold enrichment in wild type (J)0.839 81.7
J(pdba,all)number of residues [Max.]48519 81.2
J(pdbab,all)sensitivity of transposon at condition HHIG0.4616 80.7
C(vegsam)level wild type (J)5.442 80.5
Q(all)P-value (str.)8.84E-0343 80.1
A(deltae,auto)sensitivity of transposon at condition 8Caff0.4217 79.5
B(Cys,pdb100)composition percentage of Ala for pdb100d10.692 78.1
I(pdbab,all)interaction with alpha-beta proteins on different chains [yeast]029 78.0
L(sage)fold enrichment in wild type (H)0.647 77.8
F(heatec)fluctuation of expression levels in sporulation0.4643 77.2
C(vegyou)level wild type (H)5.151 76.3
J(pdbb,inter)number of residues [Ave.]385.5024 76.2
L(vegsam)fold enrichment in reference transcriptome0.252 75.8
B(Asn,pdb100)composition percentage of Met for pdb100d2.7102 75.7
J(pdbb,all)sensitivity of transposon at condition 9NaCl0.0021 74.7
J(scera,intra)sensitivity of transposon at condition 2EGTA0.0021 74.7
C(ref)level transcriptome4.855 74.4
B(Phe,pdb100)interaction on different chains [yeast]210 74.4
J(pdball,intra)overall RMS between structures [Max.]25.2126 74.3
I(scera,intra)interaction with alpha proteins [yeast]034 74.2
B(Asn,pdb40)composition percentage of Met for pdb40d2.7106 74.0
F(alpha)fluctuation of expression levels in CDC150.2853 73.9
S(all)trimmed RMS2.1357 73.6
U(foldonly)pair number (Domain exclusive)057 73.6
C(sage)level SAGE3.859 72.6
I(pdball,all)interaction on different chains [yeast]037 72.0
B(Ile,pdb100)interaction with alpha-beta proteins on different chains [yeast]111 71.8
J(scerb,inter)sensitivity of transposon at condition YPD11C0.0024 71.1
F(deve)fluctuation of expression levels in heat shock (E.coli)0.5156 70.4
L(matea)fold enrichment in SAGE-0.152 70.3
J(scerab,inter)sensitivity of transposon at condition 75mMHU0.0025 69.9
J(scerall,all)sensitivity of transposon at condition MethBl0.0025 69.9
I(scerall,all)maximal Ca atom displacement between structures[Ave.]45.4231 69.3
A(nhinges,auto)sensitivity of transposon at condition YPGly0.2826 68.7
A(kappa,auto)sensitivity of transposon at condition CyhS0.0026 68.7
I(scera,all)overall RMS between structures [Ave.]17.2032 68.3
J(scerb,intra)sensitivity of transposon at condition YPD37C0.0027 67.5
F(cdc15)fluctuation of expression levels in CDC280.2841 67.5
B(Lys,pdb40)composition percentage of Ile for pdb40d6.0135 66.9
I(scerab,all)degree of rotation angle about hinge [Ave.]85.3534 66.3
F(spor)fluctuation of expression levels in diauxic shift0.271 64.9
N(foldonly)P-value (seq.)8.02E-0177 64.4
B(Lys,pdb100)composition percentage of Ile for pdb100d5.9151 64.0
X(age)average length of fold192152 63.8
X(func)pseudogene complement of the ribbon worm426 62.9
R(all)untrimmed RMS6.8582 62.0
B(Asp,pdb100)composition percentage of Cys for pdb100d1.4161 61.7
B(Thr,pdb100)composition percentage of Ser for pdb100d6.0166 60.5
J(scera,all)sensitivity of transposon at condition BCIP0.2033 60.2
B(Thr,pdb40)composition percentage of Ser for pdb40d6.0168 58.8
B(Glu,pdb40)composition percentage of Asp for pdb40d6.0170 58.3
X(size)fluctuation of expression levels in development (worm)1.0591 57.9
B(Pro,pdb40)composition percentage of Asn for pdb40d4.3188 53.9
B(Met,pdb40)composition percentage of Leu for pdb40d8.6189 53.7
B(Glu,pdb100)composition percentage of Asp for pdb100d5.7197 53.1
A(rmsoverall,auto)sensitivity of transposon at condition 12Calc0.1439 53.0
B(Pro,pdb100)composition percentage of Asn for pdb100d4.3201 52.1
J(scerb,all)sensitivity of transposon at condition 10Ben0.0040 51.8
B(Gly,pdb100)composition percentage of Phe for pdb100d3.5203 51.7
B(Ile,pdb100)composition percentage of His for pdb100d2.1205 51.2
F(diaux)fluctuation of expression levels in alpha0.2996 50.3
B(Gly,pdb40)composition percentage of Phe for pdb40d3.5209 48.8
B(Ile,pdb40)composition percentage of His for pdb40d2.0218 46.6
B(Leu,pdb100)composition percentage of Lys for pdb100d5.9228 45.7
B(Asp,pdb40)composition percentage of Cys for pdb40d1.0230 43.6
B(Met,pdb100)composition percentage of Leu for pdb100d7.8245 41.7
B(Leu,pdb40)composition percentage of Lys for pdb40d5.6240 41.2
I(scerall,inter)interaction on same chains [yeast]182 37.9
B(Gln,pdb100)composition percentage of Pro for pdb100d4.0261 37.9
B(Val,pdb40)composition percentage of Thr for pdb40d4.9255 37.5
J(scerab,all)sensitivity of transposon at condition 003SDS0.1852 37.3
B(Ser,pdb100)composition percentage of Arg for pdb100d4.2265 36.9
B(Gln,pdb40)composition percentage of Pro for pdb40d4.0259 36.5
B(Ser,pdb40)composition percentage of Arg for pdb40d4.2263 35.5
I(scerab,inter)interaction with alpha-beta proteins on same chains [yeast]086 34.8
B(Val,pdb100)composition percentage of Thr for pdb100d4.8274 34.8
B(Tyr,pdb100)composition percentage of Trp for pdb100d0.8277 34.0
P(all)seq. identity20.54144 33.3
B(Ala,pdb100)composition percentage of Tyr for pdb40d2.6277 32.1
A(maxcadev,auto)sensitivity of transposon at condition 46Hygr0.1357 31.3
B(Tyr,pdb40)composition percentage of Trp for pdb40d0.8283 30.6
I(pdball,inter)composition percentage of Tyr for pdb100d2.5299 28.8
I(scerall,intra)interaction types [yeast]195 28.0
B(Arg,pdb40)composition percentage of Gln for pdb40d2.8305 25.2
B(Phe,pdb40)composition percentage of Glu for pdb40d5.2309 24.3
I(scerab,intra)interaction with alpha-beta proteins [yeast]0102 22.7
B(Phe,pdb100)composition percentage of Glu for pdb100d5.0335 20.2
B(Arg,pdb100)composition percentage of Gln for pdb100d2.6337 19.8
X(pseu)year of fold determined74417 0.7