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Rank report of 1gdd

The top-five ranked attributes
 B(Glu,pdb40)
composition percentage of Asp for pdb40d
P(all)
seq. identity
F(diaux)
fluctuation of expression levels in alpha
F(spor)
fluctuation of expression levels in diauxic shift
B(Glu,pdb100)
composition percentage of Asp for pdb100d
value9.561.160.560.398.1
rank79101225
%98.395.894.894.194.0


The bottom-five ranked attributes
 B(His,pdb40)
composition percentage of Gly for pdb40d
B(Ile,pdb100)
composition percentage of His for pdb100d
R(all)
untrimmed RMS
S(all)
trimmed RMS
N(foldonly)
P-value (seq.)
value4.10.41.620.353.98E-38
rank376392202203204
% 7.8 6.7 6.5 6.0 5.6


All attributes
  valuerank%
B(Glu,pdb40)composition percentage of Asp for pdb40d9.57 98.3
P(all)seq. identity61.169 95.8
F(diaux)fluctuation of expression levels in alpha0.5610 94.8
F(spor)fluctuation of expression levels in diauxic shift0.3912 94.1
B(Glu,pdb100)composition percentage of Asp for pdb100d8.125 94.0
I(pdball,inter)composition percentage of Tyr for pdb100d5.731 92.6
B(Ala,pdb100)composition percentage of Tyr for pdb40d5.431 92.4
B(Arg,pdb100)composition percentage of Gln for pdb100d6.233 92.1
B(Lys,pdb100)composition percentage of Ile for pdb100d7.642 90.0
B(Ser,pdb100)composition percentage of Arg for pdb100d7.256 86.7
B(Arg,pdb40)composition percentage of Gln for pdb40d5.457 86.0
F(alpha)fluctuation of expression levels in CDC150.3429 85.7
B(Ser,pdb40)interaction with alpha-beta proteins on different chains [pdb]140 85.1
B(Lys,pdb40)composition percentage of Ile for pdb40d7.065 84.1
B(Asn,pdb40)composition percentage of Met for pdb40d2.978 80.9
G(aaeo)fold occurrence in Cele2066 80.6
B(Asp,pdb40)composition percentage of Cys for pdb40d2.184 79.4
B(Phe,pdb40)composition percentage of Glu for pdb40d8.389 78.2
B(Cys,pdb100)composition percentage of Ala for pdb100d10.598 76.7
B(Tyr,pdb40)interaction with alpha-beta proteins on same chains [pdb]136 74.5
U(foldonly)pair number (Domain exclusive)057 73.6
B(Glu,pdb100)interaction with alpha-beta proteins [pdb]171 73.5
B(Asp,pdb100)composition percentage of Cys for pdb100d1.8112 73.3
G(mpne)fold occurrence in Mgen096 71.8
I(pdbb,inter)interaction with alpha proteins on different chains [pdb]077 71.3
I(pdbab,inter)interaction with beta proteins on different chains [pdb]080 70.1
G(bbur)fold occurrence in Mpne0102 70.0
G(cele)fold occurrence in Scer3104 69.4
B(Asn,pdb100)composition percentage of Met for pdb100d2.4140 66.7
B(Trp,pdb40)interaction with beta proteins on same chains [pdb]049 65.2
B(Asp,pdb100)interaction with beta proteins [pdb]094 64.9
G(scer)fold occurrence in Phor0122 64.1
I(pdba,inter)interaction on different chains [pdb]197 63.8
G(ctra)fold occurrence in Tpal0124 63.5
B(Cys,pdb100)interaction with alpha proteins [pdb]0100 62.7
G(tpal)fold occurrence in Bbur0127 62.6
B(Val,pdb40)interaction with alpha proteins on same chains [pdb]053 62.4
G(mthe)fold occurrence in Mjan0129 62.1
B(Ser,pdb40)composition percentage of Arg for pdb40d5.4159 61.0
G(cpne)fold occurrence in Ctra0135 60.3
G(phor)fold occurrence in Mthe0136 60.0
N(all)fold occurrence in Rpro0136 60.0
G(rpro)fold occurrence in Cpne0137 59.7
B(Pro,pdb40)composition percentage of Asn for pdb40d4.5166 59.3
B(Met,pdb40)composition percentage of Leu for pdb40d8.7174 57.4
G(mjan)fold occurrence in Aful0148 56.5
E(ref)fold percentage in reference transcriptome0.194 56.3
X(pseu)year of fold determined94187 55.5
G(mgen)fold occurrence in Hpyl0153 55.0
G(syne)fold occurrence in Aaeo0163 52.1
L(ref)fold percentage in reference genome0.1104 51.6
B(Thr,pdb100)composition percentage of Ser for pdb100d5.6204 51.4
B(Phe,pdb100)composition percentage of Glu for pdb100d6.7207 50.7
E(vegyou)fold percentage in wild type (H)0.1106 50.0
B(Met,pdb100)composition percentage of Leu for pdb100d8.3214 49.0
B(Thr,pdb40)interaction on same chains [pdb]173 48.2
B(Ala,pdb100)interaction types [pdb]1140 47.8
B(Thr,pdb40)composition percentage of Ser for pdb40d5.4224 45.1
L(vegsam)fold enrichment in reference transcriptome-0.5119 44.7
G(hpyl)fold occurrence in Hinf0191 43.8
L(sage)fold enrichment in wild type (H)-0.4122 42.5
C(vegyou)level wild type (H)1.9126 41.4
G(ecol)fold occurrence in Syne0200 41.2
G(hinf)fold occurrence in Mtub0200 41.2
C(ref)level transcriptome1.9127 40.9
B(Gly,pdb40)composition percentage of Phe for pdb40d3.3242 40.7
B(Gln,pdb40)composition percentage of Pro for pdb40d4.1248 39.2
B(Pro,pdb100)composition percentage of Asn for pdb100d3.8256 39.0
B(Cys,pdb40)composition percentage of Ala for pdb40d7.4249 39.0
G(mtub)fold occurrence in Bsub0209 38.5
B(Trp,pdb40)composition percentage of Val for pdb40d6.2254 37.7
C(heat)level heat shock0.2135 37.2
X(age)average length of fold119268 36.2
C(gal)level galactose0.2139 35.3
B(Gly,pdb100)composition percentage of Phe for pdb100d2.9277 34.0
B(Tyr,pdb100)composition percentage of Trp for pdb100d0.8277 34.0
L(gal)fold enrichment in mating type alpha-0.7145 32.6
G(bsub)fold occurrence in Ecol0230 32.4
B(Val,pdb100)composition percentage of Thr for pdb100d4.7287 31.7
E(heat)fold percentage in heat shock0.0147 31.6
C(mateal)level mating type alpha0.1148 31.2
E(vegsam)fold percentage in wild type (J)0.0147 31.0
B(Tyr,pdb40)composition percentage of Trp for pdb40d0.8283 30.6
F(heatec)fluctuation of expression levels in sporulation0.25132 30.2
L(vegyou)fold enrichment in wild type (J)-0.7149 30.0
E(sage)fold percentage in SAGE0.0123 29.7
E(mateal)fold percentage in mating type alpha0.0152 29.3
B(Trp,pdb100)composition percentage of Val for pdb100d5.6297 29.3
C(vegsam)level wild type (J)0.9153 28.8
C(sage)level SAGE0.3153 28.8
F(cdc28)fold enrichment in heat shock-0.7154 28.4
E(matea)fold percentage in mating type a0.0155 27.9
E(gal)fold percentage in galactose0.0157 27.0
L(heat)fold enrichment in galactose-0.7160 25.6
Q(all)P-value (str.)3.25E-13164 24.1
L(gal)fold enrichment in mating type a-0.7164 23.7
B(Leu,pdb40)composition percentage of Lys for pdb40d4.5314 23.0
U(all)pair number1169 21.8
B(Val,pdb40)composition percentage of Thr for pdb40d4.1320 21.6
L(matea)fold enrichment in SAGE-0.9139 20.6
B(Leu,pdb100)composition percentage of Lys for pdb100d4.5335 20.2
F(deve)fluctuation of expression levels in heat shock (E.coli)0.22153 19.0
C(matea)level mating type a0.1177 17.7
B(His,pdb100)composition percentage of Gly for pdb100d4.6369 12.1
B(Gln,pdb100)composition percentage of Pro for pdb100d2.5370 11.9
B(Ile,pdb40)composition percentage of His for pdb40d0.8363 11.0
B(His,pdb40)composition percentage of Gly for pdb40d4.1376 7.8
B(Ile,pdb100)composition percentage of His for pdb100d0.4392 6.7
R(all)untrimmed RMS1.62202 6.5
S(all)trimmed RMS0.35203 6.0
N(foldonly)P-value (seq.)3.98E-38204 5.6