YaleGerstein Lab Parts ListGeneCensusMolecular MovementsNESG helpdownload

Rank report of 1dai

The top-five ranked attributes
 G(scer)
fold occurrence in Phor
G(syne)
fold occurrence in Aaeo
G(hpyl)
fold occurrence in Hinf
G(mgen)
fold occurrence in Hpyl
G(mpne)
fold occurrence in Mgen
value6157514634
rank11111
%99.799.799.799.799.7


The bottom-five ranked attributes
 P(all)
seq. identity
B(Tyr,pdb100)
composition percentage of Trp for pdb100d
B(Tyr,pdb40)
composition percentage of Trp for pdb40d
B(Thr,pdb100)
composition percentage of Ser for pdb100d
X(pseu)
year of fold determined
value20.120.70.74.687
rank147292293305354
%31.930.528.227.415.7


All attributes
  valuerank%
G(scer)fold occurrence in Phor611 99.7
G(syne)fold occurrence in Aaeo571 99.7
G(hpyl)fold occurrence in Hinf511 99.7
G(mgen)fold occurrence in Hpyl461 99.7
G(mpne)fold occurrence in Mgen341 99.7
G(bbur)fold occurrence in Mpne331 99.7
G(tpal)fold occurrence in Bbur671 99.7
G(ctra)fold occurrence in Tpal431 99.7
G(cpne)fold occurrence in Ctra361 99.7
G(rpro)fold occurrence in Cpne391 99.7
N(all)fold occurrence in Rpro381 99.7
I(pdbb,inter)interaction with alpha proteins on different chains [pdb]71 99.6
B(Cys,pdb100)interaction with alpha proteins [pdb]91 99.6
G(mjan)fold occurrence in Aful562 99.4
G(mthe)fold occurrence in Mjan612 99.4
G(phor)fold occurrence in Mthe532 99.4
G(cele)fold occurrence in Scer1302 99.4
G(ecol)fold occurrence in Syne682 99.4
B(Val,pdb40)interaction with alpha proteins on same chains [pdb]41 99.3
I(pdba,inter)interaction on different chains [pdb]142 99.3
B(Ala,pdb100)interaction types [pdb]232 99.3
G(mtub)fold occurrence in Bsub643 99.1
L(ref)fold percentage in reference genome5.52 99.1
E(vegsam)fold percentage in wild type (J)6.22 99.1
B(Pro,pdb100)interaction types [yeast]221 99.1
B(Gln,pdb100)interaction with alpha proteins [yeast]61 99.1
B(Arg,pdb100)interaction with beta proteins [yeast]41 99.1
B(Ser,pdb100)interaction with alpha-beta proteins [yeast]111 99.1
B(Asp,pdb100)interaction with beta proteins [pdb]53 98.9
G(bsub)fold occurrence in Ecol724 98.8
G(hinf)fold occurrence in Mtub544 98.8
B(Lys,pdb100)interaction on same chains [yeast]151 98.8
B(Leu,pdb100)interaction with alpha proteins on same chains [yeast]61 98.8
B(Met,pdb100)interaction with beta proteins on same chains [yeast]21 98.8
E(matea)fold percentage in mating type a6.53 98.6
E(gal)fold percentage in galactose5.93 98.6
E(vegyou)fold percentage in wild type (H)6.23 98.6
X(enz)total number of functions associated with the fold63 98.6
B(Glu,pdb100)interaction with alpha-beta proteins [pdb]74 98.5
E(ref)fold percentage in reference transcriptome4.74 98.1
E(mateal)fold percentage in mating type alpha5.04 98.1
E(heat)fold percentage in heat shock4.84 98.1
B(Trp,pdb40)interaction with beta proteins on same chains [pdb]43 97.9
I(pdbab,inter)interaction with alpha-beta proteins on same chains [pdb]867 97.8
B(Ser,pdb40)interaction with alpha-beta proteins on different chains [pdb]46 97.8
I(scerab,inter)interaction with alpha-beta proteins on same chains [yeast]183 97.7
I(scerab,intra)interaction with alpha-beta proteins [yeast]183 97.7
B(Asn,pdb100)interaction with alpha-beta proteins on same chains [yeast]62 97.6
B(Ala,pdb40)number of enzymatic functions associated with the fold53 97.6
B(His,pdb100)interaction with beta proteins on different chains [yeast]21 97.4
G(aaeo)fold occurrence in Cele2239 97.4
B(Thr,pdb40)interaction on same chains [pdb]134 97.2
I(pdbb,all)interaction with beta proteins on different chains [yeast]04 97.0
I(pdbab,intra)interaction with alpha-beta proteins [pdb]9412 96.2
I(scerall,inter)interaction on same chains [yeast]185 96.2
J(pdbb,intra)degree of rotation angle about hinge [Max.]178.474 96.0
I(pdball,inter)interaction on same chains [pdb]8613 95.9
I(scerall,intra)interaction types [yeast]186 95.5
B(Tyr,pdb40)interaction with alpha-beta proteins on same chains [pdb]47 95.0
U(all)pair number32911 94.9
B(Phe,pdb100)interaction on different chains [yeast]92 94.9
B(Ile,pdb100)interaction with alpha-beta proteins on different chains [yeast]62 94.9
J(pdba,intra)number of putative hinges found in fold [Max.]46 94.1
E(sage)fold percentage in SAGE2.411 93.7
J(pdbab,inter)maximal Ca atom displacement between structures[Max.]72.357 93.1
J(scera,inter)sensitivity of transposon at condition 67Calc0.136 92.8
I(pdbab,inter)interaction with beta proteins on different chains [pdb]120 92.5
A(kappa,auto)sensitivity of transposon at condition CyhS1.277 91.6
I(pdball,intra)interaction types [pdb]9429 90.9
I(pdba,all)interaction with alpha proteins on different chains [yeast]013 90.2
B(Gly,pdb100)interaction with alpha proteins on different chains [yeast]14 89.7
J(scerab,intra)sensitivity of transposon at condition 20Ben0.579 89.2
S(all)trimmed RMS3.0725 88.4
J(pdbab,intra)energy difference between start and end states [Max.]412385.9012 88.1
J(scerall,inter)sensitivity of transposon at condition CyhR0.0010 88.0
J(scerall,intra)sensitivity of transposon at condition 01MMS0.3410 88.0
J(scerb,inter)sensitivity of transposon at condition YPD11C0.5511 86.7
J(scerall,all)sensitivity of transposon at condition MethBl0.6011 86.7
I(scerab,all)degree of rotation angle about hinge [Ave.]141.9614 86.1
J(pdball,all)maximum energy difference [Max.]429176.8014 86.1
J(pdball,inter)energy difference between start and end states [Ave.]138097.7315 85.1
A(deltae,auto)sensitivity of transposon at condition 8Caff0.7013 84.3
I(scera,all)overall RMS between structures [Ave.]23.2616 84.2
Q(all)P-value (str.)1.61E-0236 83.3
I(scerb,inter)interaction with beta proteins on same chains [yeast]022 83.3
J(scerb,intra)sensitivity of transposon at condition YPD37C0.7114 83.1
R(all)untrimmed RMS9.5138 82.4
X(size)fluctuation of expression levels in development (worm)1.4338 82.4
J(pdball,intra)overall RMS between structures [Max.]27.1918 82.2
B(Tyr,pdb100)interaction with alpha-beta proteins on different chains [pdb]857 82.1
I(pdbb,inter)interaction with beta proteins on same chains [pdb]057 82.1
J(scera,all)sensitivity of transposon at condition BCIP0.8015 81.9
A(rmsoverall,auto)sensitivity of transposon at condition 12Calc0.9915 81.9
I(scera,inter)interaction with alpha proteins on same chains [yeast]024 81.8
I(pdba,inter)interaction with alpha proteins on same chains [pdb]060 81.2
I(scerall,all)maximal Ca atom displacement between structures[Ave.]55.8919 81.2
I(scerb,intra)interaction with beta proteins [yeast]025 81.1
J(pdbb,all)sensitivity of transposon at condition 9NaCl0.1716 80.7
J(pdba,inter)maximum energy difference [Ave.]169878.6120 80.2
B(Trp,pdb100)interaction with beta proteins on different chains [pdb]065 79.6
J(scerab,inter)sensitivity of transposon at condition 75mMHU0.3317 79.5
A(nhinges,auto)sensitivity of transposon at condition YPGly0.9717 79.5
X(age)average length of fold25291 78.3
J(scera,intra)sensitivity of transposon at condition 2EGTA0.1818 78.3
I(pdbab,all)interaction with alpha-beta proteins on different chains [yeast]029 78.0
B(Lys,pdb40)composition percentage of Ile for pdb40d6.590 77.9
B(Val,pdb100)interaction with alpha proteins on different chains [pdb]075 76.5
B(Lys,pdb100)composition percentage of Ile for pdb100d6.599 76.4
B(Glu,pdb100)composition percentage of Asp for pdb100d6.6105 75.0
I(scera,intra)interaction with alpha proteins [yeast]034 74.2
U(foldonly)pair number (Domain exclusive)057 73.6
J(scerab,all)sensitivity of transposon at condition 003SDS0.8822 73.5
C(matea)level mating type a0.658 73.0
L(gal)fold enrichment in mating type a0.258 73.0
I(pdball,all)interaction on different chains [yeast]037 72.0
X(func)pseudogene complement of the ribbon worm720 71.4
J(scerb,all)sensitivity of transposon at condition 10Ben0.4524 71.1
I(pdbb,intra)interaction with beta proteins [pdb]093 70.8
F(deve)fluctuation of expression levels in heat shock (E.coli)0.5156 70.4
B(Met,pdb40)composition percentage of Leu for pdb40d9.4122 70.1
L(vegyou)fold enrichment in wild type (J)0.164 70.0
C(vegsam)level wild type (J)3.465 69.8
B(Asn,pdb100)composition percentage of Met for pdb100d2.5127 69.8
B(Val,pdb100)composition percentage of Thr for pdb100d6.2128 69.5
J(pdbab,all)sensitivity of transposon at condition HHIG0.1926 68.7
B(Ser,pdb40)composition percentage of Arg for pdb40d5.8129 68.4
J(pdba,all)number of residues [Max.]40532 68.3
B(Trp,pdb100)composition percentage of Val for pdb100d7.7134 68.1
L(heat)fold enrichment in galactose0.170 67.4
B(Val,pdb40)composition percentage of Thr for pdb40d6.0134 67.2
I(pdba,intra)interaction with alpha proteins [pdb]0105 67.1
C(mateal)level mating type alpha0.472 66.5
I(scerb,all)number of putative hinges found in fold [Ave.]1.8334 66.3
C(gal)level galactose0.573 66.0
N(foldonly)P-value (seq.)8.30E-0174 65.7
B(Ser,pdb100)composition percentage of Arg for pdb100d5.6144 65.7
L(gal)fold enrichment in mating type alpha-0.174 65.6
F(spor)fluctuation of expression levels in diauxic shift0.271 64.9
B(Asn,pdb40)composition percentage of Met for pdb40d2.4144 64.7
B(Glu,pdb40)composition percentage of Asp for pdb40d6.3145 64.5
B(Trp,pdb40)composition percentage of Val for pdb40d7.4147 64.0
B(Met,pdb100)composition percentage of Leu for pdb100d9.0155 63.1
C(sage)level SAGE2.080 62.8
F(cdc28)fold enrichment in heat shock-0.180 62.8
C(heat)level heat shock0.581 62.3
L(sage)fold enrichment in wild type (H)0.180 62.3
B(Thr,pdb100)interaction on different chains [pdb]8121 62.1
C(ref)level transcriptome3.584 60.9
L(vegsam)fold enrichment in reference transcriptome-0.285 60.5
C(vegyou)level wild type (H)3.585 60.5
B(Phe,pdb100)composition percentage of Glu for pdb100d7.1171 59.3
B(Gly,pdb100)composition percentage of Phe for pdb100d3.7179 57.4
B(Ala,pdb100)composition percentage of Tyr for pdb40d3.4175 57.1
A(maxcadev,auto)sensitivity of transposon at condition 46Hygr0.5936 56.6
B(Phe,pdb40)composition percentage of Glu for pdb40d7.1177 56.6
L(matea)fold enrichment in SAGE-0.576 56.6
I(pdball,inter)composition percentage of Tyr for pdb100d3.4184 56.2
B(Gly,pdb40)composition percentage of Phe for pdb40d3.7179 56.1
B(Arg,pdb100)composition percentage of Gln for pdb100d3.9185 56.0
J(pdbb,inter)number of residues [Ave.]312.9245 55.4
F(diaux)fluctuation of expression levels in alpha0.388 54.4
B(His,pdb100)composition percentage of Gly for pdb100d7.6192 54.3
B(Arg,pdb40)composition percentage of Gln for pdb40d3.8188 53.9
B(Leu,pdb40)composition percentage of Lys for pdb40d6.1191 53.2
F(heatec)fluctuation of expression levels in sporulation0.3191 51.9
B(Pro,pdb40)composition percentage of Asn for pdb40d4.2198 51.5
F(alpha)fluctuation of expression levels in CDC150.2499 51.2
B(Leu,pdb100)composition percentage of Lys for pdb100d6.2206 51.0
B(Asp,pdb100)composition percentage of Cys for pdb100d1.1216 48.6
B(Cys,pdb40)composition percentage of Ala for pdb40d8.0214 47.5
B(Asp,pdb40)composition percentage of Cys for pdb40d1.1214 47.5
B(His,pdb40)composition percentage of Gly for pdb40d7.2214 47.5
B(Cys,pdb100)composition percentage of Ala for pdb100d7.9224 46.7
B(Pro,pdb100)composition percentage of Asn for pdb100d3.9238 43.3
B(Ile,pdb100)composition percentage of His for pdb100d1.9242 42.4
B(Ile,pdb40)composition percentage of His for pdb40d1.9241 40.9
F(cdc15)fluctuation of expression levels in CDC280.2175 40.5
B(Thr,pdb40)composition percentage of Ser for pdb40d5.1255 37.5
B(Gln,pdb40)composition percentage of Pro for pdb40d4.0259 36.5
B(Gln,pdb100)composition percentage of Pro for pdb100d3.9271 35.5
P(all)seq. identity20.12147 31.9
B(Tyr,pdb100)composition percentage of Trp for pdb100d0.7292 30.5
B(Tyr,pdb40)composition percentage of Trp for pdb40d0.7293 28.2
B(Thr,pdb100)composition percentage of Ser for pdb100d4.6305 27.4
X(pseu)year of fold determined87354 15.7