Comparer for protein structure rankings
Qian, J. et.al (2001) Nucleic Acids Research 29: 1750-64
[First 30 records][Entire table]
[Display values][Display ranks]
Image size: [50][70][100][120]F(cdc28)
fluctuation of expression levels in CDC28X(size)
average length of foldB(Ala,pdb100)
composition percentage of Ala for pdb100dB(Leu, pdb100)
composition percentage of Leu for pdb100dB(Val,pdb100)
composition percentage of Val for pdb100dMax in column 0.91 785 23.0 21.5 15.5 Min in column 0.05 30 1.3 0.9 0.9 Average 0.3 182.5 8.4 8.5 6.9 Non zero hits 126 420 420 416 416 Ranked folds (click on arrows to re-rank)
d2bnh__:. (1.39)0.51 456 7.0 21.5 4.2
d1lre__:. (1.39). 81 8.6 18.5 2.5
d1gln_1:. (1.39)- 163 11.7 18.4 4.3
d1a5t_1:. (1.39)- 158 13.4 18.3 6.7
d1jhga_:. (1.39)- 103 9.1 17.9 4.7
d1fts_1:. (1.39)- 85 8.8 15.8 5.8
d1coo__:. (1.39)- 81 6.1 15.3 7.1
d1rpo__:. (1.39). 59 10.0 15.2 0.0
d1pysb2:. (1.39)- 76 8.6 15.1 7.9
d2tct_2:. (1.39). 132 10.6 14.9 4.3
d1a1x__:. (1.39). 108 4.5 14.9 7.2
d1ccd__:. (1.39). 70 5.2 14.6 4.8
d1uag_2:. (1.39)- 140 10.7 14.3 6.4
d2lbd__:. (1.39)0.31 244 5.2 14.3 5.2
d2tct_1:. (1.39)- 63 8.8 14.2 7.5
d1vii__:. (1.39)- 36 8.3 13.9 2.8
d1brsd_:. (1.39)- 88 8.4 13.5 5.6
d2rig__:. (1.39)- 142 6.1 13.3 3.9
d1wer__:. (1.39)0.23 226 6.6 13.3 6.9
d1aln_2:. (1.39)- 147 16.0 13.3 2.7
d2ifo__:. (1.39)- 54 9.5 13.3 5.8
d1kxu_2:. (1.39)0.26 122 8.1 13.1 6.7
d1gne_1:. (1.39)0.23 133 6.6 13.0 4.8
d1cuk_2:. (1.39)- 77 7.8 13.0 7.8
d1atia1:. (1.39)- 99 15.3 12.9 9.0
d1a6ja_:. (1.39)- 153 9.2 12.9 6.1
d1ddf__:. (1.39)- 106 8.0 12.7 5.7
d1aa7a_:. (1.39). 157 8.2 12.7 7.0
d1a0p__:. (1.39)- 183 7.9 12.6 4.5
d1ecra_:. (1.39)- 305 9.1 12.6 7.4
The images of protein structures were taken from www.rcsb.org
The classification of folds is from SCOP version 1.39
Questions, comments, and suggestions qian@csb.yale.edu