Comparer for protein structure rankings
Qian, J. et.al (2001) Nucleic Acids Research 29: 1750-64
[First 30 records][Entire table]
[Display values][Display ranks]
Image size: [50][70][100][120]I(pdbab, inter)
interaction with alpha-beta proteins on different chains [pdb]J(pdball,intra)
interaction on same chains [pdb]J(pdba,intra)
interaction with alpha proteins on same chains [pdb]J(pdba,all)
interaction with alpha proteins [pdb]J(scerb,inter)
interaction with beta proteins on different chains [yeast]Max in column 7 501 176 494 2 Min in column 1 1 1 1 1 Average 1.4 27.1 12.7 20.6 1.3 Non zero hits 163 201 59 104 3 Ranked folds (click on arrows to re-rank)
d1ajw__:. (1.39)7 501 18 29 0
d1aj2__:. (1.39)7 357 20 20 0
d2aw0__:. (1.39)6 36 0 2 0
d1eny__:. (1.39)5 . . . 0
d1tif__:. (1.39)5 24 0 0 0
d2prd__:. (1.39)4 3 0 0 .
d1opy__:. (1.39)4 68 2 4 0
d2prk__:. (1.39)4 0 0 0 0
d1dai__:. (1.39)4 86 0 0 0
d1rec__:. (1.39)3 8 7 7 .
d1uch__:. (1.39)3 14 0 0 .
d2itg__:. (1.39)3 22 0 13 0
d1har__:. (1.39)3 93 93 93 0
d3lck__:. (1.39)3 0 0 0 .
d1tfe__:. (1.39)2 . . . .
d2a0b__:. (1.39)2 0 0 2 .
d1xxaa_:. (1.39)2 2 0 0 .
d1dst__:. (1.39)2 78 0 0 0
d1bv1__:. (1.39)2 1 0 0 .
d1brsd_:. (1.39)2 22 22 22 0
d1rblm_:. (1.39)2 . . . .
d1neda_:. (1.39)2 . . . .
d1dhs__:. (1.39)2 50 12 12 0
d1bfd_3:. (1.39)2 0 0 0 0
d3vub__:. (1.39)2 . . . .
d1alo_3:. (1.39)2 1 1 5 .
d1rot__:. (1.39)2 2 0 0 .
d1agi__:. (1.39)2 0 0 2 .
d1efva2:. (1.39)2 . . . .
d1xjo__:. (1.39)2 16 0 0 0
The images of protein structures were taken from www.rcsb.org
The classification of folds is from SCOP version 1.39
Questions, comments, and suggestions qian@csb.yale.edu