Comparer for protein structure rankings
Qian, J. et.al (2001) Nucleic Acids Research 29: 1750-64
[First 30 records][Entire table]
[Display values][Display ranks]
Image size: [50][70][100][120]G(mgen)
fold occurrence in MgenG(mpne)
fold occurrence in MpneF(cdc15)
fluctuation of expression levels in CDC15F(alpha)
fluctuation of expression levels in alphaF(diaux)
fluctuation of expression levels in diauxic shiftMax in column 34 33 0.67 1.48 0.84 Min in column 1 1 0.12 0.11 0.11 Average 2.4 2.5 0.3 0.3 0.2 Non zero hits 95 101 203 193 202 Ranked folds (click on arrows to re-rank)
d1dai__:. (1.39)34 33 0.24 0.3 0.2
d2ifo__:. (1.39)13 16 0.26 0.35 0.23
d1pysa_:. (1.39)10 11 0.22 0.27 0.16
d1nsya_:. (1.39)9 9 0.2 0.32 0.16
d2prd__:. (1.39)8 8 0.31 0.36 0.18
d1ojt_2:. (1.39)7 8 0.27 0.31 0.21
d1aj2__:. (1.39)7 8 0.28 0.34 0.24
d2itg__:. (1.39)5 5 0.33 0.4 0.22
d1eny__:. (1.39)4 5 0.28 0.29 0.2
d1xjo__:. (1.39)4 3 0.21 0.28 0.16
d1bgw__:. (1.39)4 4 0.28 0.23 0.2
d1cvl__:. (1.39)4 4 0.24 0.26 0.16
d1oroa_:. (1.39)4 4 0.2 0.28 0.17
d1xbl__:. (1.39)4 4 0.22 0.35 0.17
d1bfd_3:. (1.39)3 3 0.32 0.31 0.15
d1mxa_3:. (1.39)3 3 0.22 0.32 0.29
d1plq_2:. (1.39)3 3 0.5 1.08 0.84
d1hmy__:. (1.39)3 5 0.22 0.39 0.2
d2aw0__:. (1.39)3 3 0.22 0.34 0.21
d1dar_1:. (1.39)3 3 0.27 0.3 0.17
d1tfe__:. (1.39)2 2 - - -
d1a6q__:. (1.39)2 1 0.19 0.21 0.17
d1iba__:. (1.39)2 1 0.56 0.26 0.17
d1a8e__:. (1.39)2 3 0.24 - 0.35
d1coo__:. (1.39)2 1 - - -
d1ass__:. (1.39)2 2 0.2 0.27 0.2
d2dkb__:. (1.39)2 2 0.31 0.35 0.22
d1rot__:. (1.39)2 2 0.25 0.38 0.13
d1jud__:. (1.39)2 1 0.24 0.32 0.17
d1pkp_1:. (1.39)2 2 0.28 0.33 0.16
The images of protein structures were taken from www.rcsb.org
The classification of folds is from SCOP version 1.39
Questions, comments, and suggestions qian@csb.yale.edu