Comparer for protein structure rankings
Qian, J. et.al (2001) Nucleic Acids Research 29: 1750-64
[First 30 records][Entire table]
[Display values][Display ranks]
Image size: [50][70][100][120]S(all)
seq. identityF(alpha)
fluctuation of expression levels in alphaF(diaux)
fluctuation of expression levels in diauxic shiftB(Asp,pdb40)
composition percentage of Asp for pdb40dB(Asp,pdb100)
composition percentage of Asp for pdb100dMax in column 100 1.48 0.84 12.9 10.9 Min in column 11.02 0.11 0.11 1.5 1.5 Average 30.2 0.3 0.2 5.7 5.6 Non zero hits 216 193 202 408 420 Ranked folds (click on arrows to re-rank)
d1hoe__:. (1.39)100 - - 6.8 6.8
d1aco_2:. (1.39)99.62 0.32 0.23 6.5 6.5
d2sici_:. (1.39)99.07 . . 4.7 4.8
d1bno__:. (1.39)98.8 - - . 3.6
d1eft_2:. (1.39)80.04 0.27 0.22 5.2 2.6
d1gpl_1:. (1.39)75.57 . . 3.1 4.7
d1ycra_:. (1.39)71.59 . . 3.7 4.2
d1mnma_:. (1.39)64.71 0.3 0.26 3.0 2.6
d1gia_1:. (1.39)61.16 0.56 0.39 9.5 8.1
d1sat_1:. (1.39)60.89 . . 10.3 9.6
d2prk__:. (1.39)60.29 0.44 0.28 4.0 3.6
d1an7a_:. (1.39)57.25 0.29 0.15 5.1 4.5
d3pfk__:. (1.39)55.14 0.32 0.12 7.2 6.7
d1rss__:. (1.39)53.52 0.32 0.14 5.4 4.7
d1puc__:. (1.39)53.41 0.12 0.18 4.8 4.5
d1rblm_:. (1.39)52.9 . . 4.1 4.5
d1thw__:. (1.39)52.8 . . 6.3 5.8
d1vpe__:. (1.39)51.49 0.43 0.16 7.9 5.8
d1ccd__:. (1.39)50.65 . . 5.7 5.0
d1agx__:. (1.39)50.52 0.46 0.23 6.2 6.9
d1mhyg_:. (1.39)49.1 0.23 0.2 6.8 6.5
d2cts__:. (1.39)48.37 0.66 0.45 3.7 4.2
d1trla_:. (1.39)47.83 . . 6.9 6.8
d1qnf_1:. (1.39)47.29 - - 4.8 4.6
d1eaf__:. (1.39)46.9 0.26 0.16 5.9 5.6
d1avc__:. (1.39)46.45 - - 9.3 7.7
d1pkm_1:. (1.39)46.45 - - 6.5 9.0
d153l__:. (1.39)46.43 - - 6.6 6.1
d1msc__:. (1.39)46.15 . . 3.8 3.6
d1drw_2:. (1.39)45.82 0.39 0.18 7.1 6.3
The images of protein structures were taken from www.rcsb.org
The classification of folds is from SCOP version 1.39
Questions, comments, and suggestions qian@csb.yale.edu